Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0995 ATGATTTTGTGTGGGAGTCCTCATCCTTATTTCGATAGAAAAACATCCATCGTGAGTAAGTACATTAGTGAATTGGATGATTGCGAGAAGCTATTTATTCCAATGCATGACGAATGCCCTGGTCATTGGTATCTGTGCGTCATTGACTTCAAAAACTCTCATACCCAAATTTCGGACTCATTACGATCGAAGAATCAAGACAAGTTCCGGTTTAAGAGTGTCAAAATAGTGGTTGAATTTTGTCAAACCTTCTTCAAACTGTATGACATAGGGAAATATGTCTTCCAATTCTCCATTGATTGGGCTCCTTCGATTCCGACCCAAGAGAATGGGTGGGACTGTGGAGTGCATGTCATTAGACATATGCAGAGATTCAAAAATGGTGATCCGATGACGAGCTCCGACTTTTGTAATTTTATGAAAATACGTCGAGAAATAGCATGTGATTTAGTTTTACACGAGGGAAATAGAGAAAAACAAACCATTGTGGCTATTGTTTGTACAAAGACGTCGACACGAGCAATGAAAAAATTATTATTATGA 543 0.3831 MILCGSPHPYFDRKTSIVSKYISELDDCEKLFIPMHDECPGHWYLCVIDFKNSHTQISDSLRSKNQDKFRFKSVKIVVEFCQTFFKLYDIGKYVFQFSIDWAPSIPTQENGWDCGVHVIRHMQRFKNGDPMTSSDFCNFMKIRREIACDLVLHEGNREKQTIVAIVCTKTSTRAMKKLLL* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0995 180 Gene3D Adenoviral Proteinase; Chain A 10 153 - -
Vvi2g0995 180 ProSiteProfiles Ubiquitin-like protease family profile. 1 125 IPR003653 GO:0006508|GO:0008234
Vvi2g0995 180 Pfam Ulp1 protease family, C-terminal catalytic domain 25 135 IPR003653 GO:0006508|GO:0008234
Vvi2g0995 180 SUPERFAMILY Cysteine proteinases 18 151 IPR038765 -
Vvi2g0995 180 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 20 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0995 Vvi-Chr2 14455264 14456105 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0995 - K08592 vvi:104878148 361.303