Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0981 ATGATTGTGACTGCAAGGGTCATAGACTGCCATGTGCACTTTATATGCCCTCAATTGGCCTATGAAGCCATGTCAAGTGGCATCACAACATTAGTGAGCAGCGGAACGGGACCTGCTGATGGAACTCATGCAACTACTTGTACATCAGCATCCTCACATATGAAATTCATGCTGCAATCAGCTGATGACCTGCCACTGAATTTTGGTTCAACAGGAAAAGGGAATATTGCCAAACCAGACAGGCTACATGAAATAATTAGAACCTGGCAAACTGCTCACGAGATGAAGTCACAAAGAGGATCACTTGATGCTAGTGGAGTGGATAACGACAACCTCCGAATTAAACGATGCGTTGCAAAATACACTATAAGTCCCGCAAGGCCTAATGGCTTTTCGCGATTTGTCGGCTCCATTGAGGTGGGGAAGGTGGCTGATTTTGTTCTCTGGAATCCATCTTTCTTTAGGGCAAAACCAGAAATGGTGATAAAAGGTGGTGTAATTGCATGGGCTAACATGGGGTAA 522 0.4483 MIVTARVIDCHVHFICPQLAYEAMSSGITTLVSSGTGPADGTHATTCTSASSHMKFMLQSADDLPLNFGSTGKGNIAKPDRLHEIIRTWQTAHEMKSQRGSLDASGVDNDNLRIKRCVAKYTISPARPNGFSRFVGSIEVGKVADFVLWNPSFFRAKPEMVIKGGVIAWANMG* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0981 173 SUPERFAMILY Metallo-dependent hydrolases 8 87 IPR032466 -
Vvi2g0981 173 Pfam Amidohydrolase family 91 167 IPR006680 GO:0016787
Vvi2g0981 173 Pfam Amidohydrolase family 3 74 IPR006680 GO:0016787
Vvi2g0981 173 PRINTS Urea amidohydrolase (urease) protein signature 141 154 IPR005848 GO:0006807|GO:0009039|GO:0016151
Vvi2g0981 173 PRINTS Urea amidohydrolase (urease) protein signature 115 130 IPR005848 GO:0006807|GO:0009039|GO:0016151
Vvi2g0981 173 Gene3D - 86 161 - -
Vvi2g0981 173 PANTHER UREASE 1 87 - -
Vvi2g0981 173 ProSiteProfiles Urease domain profile. 6 84 IPR017951 GO:0006807|GO:0009039|GO:0016151
Vvi2g0981 173 Gene3D - 6 85 - -
Vvi2g0981 173 ProSiteProfiles Urease domain profile. 85 173 IPR017951 GO:0006807|GO:0009039|GO:0016151
Vvi2g0981 173 SUPERFAMILY Metallo-dependent hydrolases 85 147 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0981 Vvi-Chr2 14153438 14153959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0981 K01427 - vvi:100263023 164.466