Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0977 ATGGCATCCTCGTCCAATAACAACACAAATGTGGAGAACATCACAAATAAGGTGGCGACAGTGGCGTTGGATGACGAAGAAATCGAAGTGGAAGATACGGATTTTCACGAGGAACAGTCGGTGACGAAGTACGACCTACGATTCGCTTTGGTTGGGCGTTTCCTTACAGAGCGTTTTATCAGGTTAAATGAAATGAGCCAAGTCATGGCTGCTAACTGGAGGCCAGGTATGGGTATTTCAATACAGGAGATCTATCCGCAACGTTTTCTTTTTCAGTTCGGCCATGAAGCAGACATCCGGAGAATTCAAGAGAGTGGTCCATGGACTTATGACAACCACCCACTTATCTTTGAACGTGTAGCGCAGGGGGATAATTTGGATAAGGTTGATCTTAATGAACTGGCTATGTGGATTCAATTGCATGATACAATATGTCGGATTCTATTGCGCGAAAGATTGGAAGCCACTTGGGTGACAATTCGGTATGAAAGGCTCCCCACATATTGTTTTCAATGCGGTATGTTAGGCCATGGAGAAAAATTCTGTCGTCTGAATTATGCCACGAAAGAGGGTGTTAATGTTCGTAACTATGGTCCTGAATTGCGGGCTCTTCCGCGACGTGCAGCTCAGTTACGGATTGGGGAGAAATGGCTCAAGGCAGCTCTGGTGATGCTTACGATTGAAGATGGAAAGGCGAAGATTTCGCCACCTTCTGGGGATGACATGGATTGCGGCGGGAATAGGGAGAATTCAAATGTGGGTAGTGATGGAGAACAGAAAGGGGCAATTACCATACATGGACCACATGAGGATGGTAATGGCAAGAAAGTGGAGCCAACATCTGCGCCTCAAACCACGAAGTTTACAGCTGACCAGATTGTGAATAAATTACCTGAATCAGTATTTTTTGAAGAGGTGGACGTGACAGGGGTTGAACCAAAGCGCAAGAGAGTGGGCCTTACCCAAGAAGCCCATTCAACTAATGATCCAATGGAGGGGACAAAGGTGCAGGTCTGGGGCGATTCTTGGTTGCCTGACAATTCAAATCGACTTATCATTACTCCTCCTATTGCTGGTTTCGACGAAATTAAAGTGGACGAGTTAATTACTGAAGGGTTGTGGCGTGAGGATTTCATAAGGGACAAGTTTATGGCTAGAGATGCCGACCTCATATTGTATATTCCACTTCCTATGTCAAGTCGTGAAGATCAGATCTCCTGGAGTTTTGATGCTAGAGGTGAATATACTGCCAGAAGCGGCTATGGTGCTTTGAGATGTTTTAGACAATCTGCAGCTCTTGTGGCTAGTGATGTCGATTCTAATTTTGTTTGGGCTCAGTTATGGAAGGTTACAACACCTCCCAAAATTCTAAATTTTGCTTGGAGGGCGGCAAGGAATTGCTTACCTACAAGATTTGCTTTGACTATTCGCCATGTTGACACTCCAATGTGTTGTCCCATCTGCAGATCAGAACCAGAAACTACCCTTCACGCTCTTGTAGAATGTGTAGCTACTCGTGATGTTTGGGATGAATCTGGTCTTGCTATGCTACAAGGTAATTTTGGAAGTTTTGTGGATTGGTTAGCTACGATGTTTGCATATTGTGACTCTGTTGTATTTGCTAAATATCTTGCTGTTTGTTGGGGATTATGGTGGCGTAGAAATGATATTGTTTGGAATGGTAGAATTCGGCATTCGCAGCAAGTTGTTAATGGTTGTTTCACAATGTTGGAAAGTTGGTTTCATGCAAATGAGACGTTGGCTACTGCAGTGACTGTTCCTTCATATAGTTCCAAATGGCAGAAACCAGATTATGGCTGGATTAAGATTAATGTGGATGGGGCTGTATTTCCGGATAAAGGCGCTATAGGTGCTGTCTTCCGAGATCATTAG 1893 0.4422 MASSSNNNTNVENITNKVATVALDDEEIEVEDTDFHEEQSVTKYDLRFALVGRFLTERFIRLNEMSQVMAANWRPGMGISIQEIYPQRFLFQFGHEADIRRIQESGPWTYDNHPLIFERVAQGDNLDKVDLNELAMWIQLHDTICRILLRERLEATWVTIRYERLPTYCFQCGMLGHGEKFCRLNYATKEGVNVRNYGPELRALPRRAAQLRIGEKWLKAALVMLTIEDGKAKISPPSGDDMDCGGNRENSNVGSDGEQKGAITIHGPHEDGNGKKVEPTSAPQTTKFTADQIVNKLPESVFFEEVDVTGVEPKRKRVGLTQEAHSTNDPMEGTKVQVWGDSWLPDNSNRLIITPPIAGFDEIKVDELITEGLWREDFIRDKFMARDADLILYIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAALVASDVDSNFVWAQLWKVTTPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSEPETTLHALVECVATRDVWDESGLAMLQGNFGSFVDWLATMFAYCDSVVFAKYLAVCWGLWWRRNDIVWNGRIRHSQQVVNGCFTMLESWFHANETLATAVTVPSYSSKWQKPDYGWIKINVDGAVFPDKGAIGAVFRDH* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0977 630 Pfam Zinc knuckle 154 183 IPR025836 -
Vvi2g0977 630 MobiDBLite consensus disorder prediction 234 282 - -
Vvi2g0977 630 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 333 630 - -
Vvi2g0977 630 Pfam Domain of unknown function (DUF4283) 44 141 IPR025558 -
Vvi2g0977 630 Pfam zinc-binding in reverse transcriptase 439 509 IPR026960 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0977 - - vvi:109124300 445.277