Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0970 ATGAGTGCTGGGATTTTTGTGGTGACATCTACAGGACAAGGCCATCTCTTCCCCTGCATTGAACTCTGTAACCATCTCGCTTCCCGCAATTACCAAGCTACCCTCGTCCTCCCCTCTCAGCTCTCCTCTTCTCTTCCTCCCTCTTTCCTCCAAAACCCTCTCCTCCGCCCCGCCCCAATCACAGCCCCTGCCCGTCTCATGGTCCCGGAATCCGACCCCCTCCGCCAACAATCGGCCGCGGAGCTTGAGGCTTATCTCTCTTCCACATCGGATTCGGTTCGGATCCTCTGCGCGGTTGTTGATTTTCAGATGAGCTGGACCAAGGGTATTTTCTGGAAATTCAACATTCCAGTCATCGGATTCTTCACCTTCGGCGCCTGCGCCGCCGCCATGGAGTGGGGCGCCTGGAAGGTCGACGCCGGAAACATCAGACCCGGCGAGTCCCGTACGATCCCCGGCTTGCCGGAGGAGATGTGTGTTGAGTACTCCGACCTCAAACGCCGACCTGGAGGGCCTCCACGCGGCATCGGCGGTCCACCCGGCCCGCGACCAGGCGGCAGAGGCCCACCGAAGCCCGGCGACATGCCGCCGTGGGTTCCGGCGATAGAGGGATCGATCGGGCTGATGTTCAACACGTGTGACGATCTTGAGCGTCCATTTTTGGAGTACATGGGCAATCAAATGGGAATGCCAGTATGGGGCGTAGGCCCACTCTTGCCGGAACAGTACTGGAAATCCCTAAATTCCCTCATCCGCGACGGCCAAATCAGAGCTTCAAAACATGAGAGCAACTTCACAGAAGATCATGTGATCCAGTGGTTAGAATCAAGACAAGAACGATCGGTACTATACGTATCATTTGGCAGTGAAGTGACTCCAACCACAGAAGAGTTCCATGAATTAGCAAGGGCATTAGAAGACTCCAACCCACCATTCATATGGGCCATAAAGAACAGCTCCGAACTCGCCTTTCTAGATGAGCTGGAAAAGAGAGTGGGCAAAAGAGGACTGATAATAAGGGGATGGGCGCCACAGTTACTGATTCTAAGCCATAAATCAACTGGTGGGTTTATATCTCACTGTGGCTGGAACTCCACAGCAGAAGCAGTAGGGCTGGGGGTTCCGATATTGGCGTGGCCGATAAGGGGAGATCAACACTACAATGCGAAGTTGGTGGTGAAGCAGCTGAAGGTGGGGGCAATGGCAGTGGCGTCGGAGAGGGCTGGGAAGGAGGATATAGTGAAGGGAATAGAGAGGGTGATGGGAGATGAAGAGTTGAGAAAGCGTGCGGGGATGTTGCGAAGGAGATTTGAGAGTGGATTTCCTGGGAGCTGTGAGGCTGCCTTTGAAGCTGTTGGGAAATTTATTAGCCAAAGAGCAACTTAA 1386 0.5426 MSAGIFVVTSTGQGHLFPCIELCNHLASRNYQATLVLPSQLSSSLPPSFLQNPLLRPAPITAPARLMVPESDPLRQQSAAELEAYLSSTSDSVRILCAVVDFQMSWTKGIFWKFNIPVIGFFTFGACAAAMEWGAWKVDAGNIRPGESRTIPGLPEEMCVEYSDLKRRPGGPPRGIGGPPGPRPGGRGPPKPGDMPPWVPAIEGSIGLMFNTCDDLERPFLEYMGNQMGMPVWGVGPLLPEQYWKSLNSLIRDGQIRASKHESNFTEDHVIQWLESRQERSVLYVSFGSEVTPTTEEFHELARALEDSNPPFIWAIKNSSELAFLDELEKRVGKRGLIIRGWAPQLLILSHKSTGGFISHCGWNSTAEAVGLGVPILAWPIRGDQHYNAKLVVKQLKVGAMAVASERAGKEDIVKGIERVMGDEELRKRAGMLRRRFESGFPGSCEAAFEAVGKFISQRAT* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0970 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 439 - -
Vvi2g0970 461 Gene3D Glycogen Phosphorylase B; 255 437 - -
Vvi2g0970 461 FunFam Glycosyltransferase 268 441 - -
Vvi2g0970 461 PANTHER GLYCOSYLTRANSFERASE 5 436 - -
Vvi2g0970 461 MobiDBLite consensus disorder prediction 173 197 - -
Vvi2g0970 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 429 IPR002213 GO:0008194
Vvi2g0970 461 CDD GT1_Gtf-like 5 450 IPR002213 GO:0008194
Vvi2g0970 461 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Vvi2g0970 461 MobiDBLite consensus disorder prediction 164 197 - -
Vvi2g0970 461 Gene3D Glycogen Phosphorylase B; 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0970 Vvi-Chr2 13919731 13921116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0970 12 436 Glycosyltransferase AT2G36780 30.508 4.62e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0970 - - vvi:100258579 863.218