Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0966 ATGTCTGTCCATATCATAGTGTTCCCATGTTTTGGCCAAGGCCATCTCCTCCCTTGCTTTGAGCTCTGCAAACACCTCGCCTCCCGCACCTTCAACACTACCCTCATCATCTCCTCCAATCTCTCCTCCTCCATCCCCTCCGATCTCCGCCGTATTCCTCTCATCCACATCTTTGAGATCTCATCCTCATTTCCTCCTCCTCCTCCGCCATCGTCGCCCTCCCCGGATTCCGATCCCATGAGCCACCATCATCGCCACCAGCATCAGATGGGTACGGCCATCGAATCCCTCCTCTCTTCCAGATCCACATCCCCAGACTACGTCCCACCCCTCTGTGCCATAATCGATGTGATGATGAGCTGGAGCAAAGGTATTTTTCATAAGTTTAACATCCCACTCGTTTCTTTCTTCACCTCCGGTGCCTGCTCCGCCGCCATGGAGTACGCCTCCTGGAAAGCCGGCGCCTTCAACATCAAGCCCGGCGAAGTCCTACCCCTTCCCGGCCTACCCGAAGACATGGCCTTGACTTACTCCGACCTTCAACGCGGCCCTCACGGTCCTCCTGGCGGCCCACCTGGACCCCCCGGTTCAGGTCGCCCACCTGGACCACCCGATGCAAGAGGTCCACCACGGTCGGGTCCCAAGTTCGGGGGGCCACCCAAACCAGGGCACCAGCCACCGTGGGTCGTCGAGGCAGCGGGCTCGATCGCGCTTATGATCAACACGTGTGACGACCTGGAGCGTCCGTTCATCGAGTACGTGGCCTACGAAACCGGAATCCCGGTCTGGGGTGTGGGCCCGCTTTTGCCAGATCAGTACTGGAACTCATCCGGTTCGCTCCTCCACGATCGAGACATCCGACCCAACAGGAAATCCAGCTGCACTGAGGAGGAGGTGATCCAGTGGCTAGACTCCAAGCCCCGTGGATCCGTCCTCTACGTGTCATTCGGAAGCGAGGTAGGTCCTACCATGGAGGGCTACGCCCAACTGGCGCTTGCATTAGAAGCCTCGAACCGGGCATTCATCTGGGTGATCCAACCCGGTTCAGGCCGGCCAGGTCCACCTCGACCACCGGGTTCAGACTCAAACGAAGACAGCGGATACTACCCACATGGATTGGAGGAGAAAGTAGGGAAAAGAGGTCTGATAATACGTGGGTGGGCACCACAACTGTTGATACTGAGTCACCCATCGACAGGTGGATTTCTCTCACACTGTGGATGGAACTCCACTGTGGAGGCAACAGGGCGTGGAGTGCCCTTTTTGGCTTGGCCAATCCGTGGAGACCAGTACTACGATGCGATGCTAGTGGTGAAACATCTCAAAATTGGGTACATGGTGTTTGCTAAAGATGCTTCTGAAACCATCGTAAAAGAGGCCATAGTTGACGGAATAGAGAAGGTGATGAGTGATAAAGACATGAAGAAAAGGGCGGAGATGATAAGTGGTAAGTTTGGGAATGAGTTTCCGGCGACTTCGGCTGCTGCTTTGGATGCTTTTAGGGATTTTATCAACCAAAGGGCTCCATAA 1530 0.5569 MSVHIIVFPCFGQGHLLPCFELCKHLASRTFNTTLIISSNLSSSIPSDLRRIPLIHIFEISSSFPPPPPPSSPSPDSDPMSHHHRHQHQMGTAIESLLSSRSTSPDYVPPLCAIIDVMMSWSKGIFHKFNIPLVSFFTSGACSAAMEYASWKAGAFNIKPGEVLPLPGLPEDMALTYSDLQRGPHGPPGGPPGPPGSGRPPGPPDARGPPRSGPKFGGPPKPGHQPPWVVEAAGSIALMINTCDDLERPFIEYVAYETGIPVWGVGPLLPDQYWNSSGSLLHDRDIRPNRKSSCTEEEVIQWLDSKPRGSVLYVSFGSEVGPTMEGYAQLALALEASNRAFIWVIQPGSGRPGPPRPPGSDSNEDSGYYPHGLEEKVGKRGLIIRGWAPQLLILSHPSTGGFLSHCGWNSTVEATGRGVPFLAWPIRGDQYYDAMLVVKHLKIGYMVFAKDASETIVKEAIVDGIEKVMSDKDMKKRAEMISGKFGNEFPATSAAALDAFRDFINQRAP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0966 509 Gene3D Glycogen Phosphorylase B; 235 284 - -
Vvi2g0966 509 Gene3D Glycogen Phosphorylase B; 285 483 - -
Vvi2g0966 509 FunFam Glycosyltransferase 297 487 - -
Vvi2g0966 509 MobiDBLite consensus disorder prediction 349 370 - -
Vvi2g0966 509 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 299 480 IPR002213 GO:0008194
Vvi2g0966 509 Gene3D Glycogen Phosphorylase B; 1 189 - -
Vvi2g0966 509 MobiDBLite consensus disorder prediction 63 88 - -
Vvi2g0966 509 MobiDBLite consensus disorder prediction 185 226 - -
Vvi2g0966 509 CDD GT1_Gtf-like 4 482 IPR002213 GO:0008194
Vvi2g0966 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 504 - -
Vvi2g0966 509 PANTHER GLYCOSYLTRANSFERASE 3 484 - -
Vvi2g0966 509 MobiDBLite consensus disorder prediction 178 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0966 Vvi-Chr2 13768305 13769834 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0966 2 477 Glycosyltransferase AT2G36780 27.856 4.03e-52 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0966 - - vvi:100263727 898.656