Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0961 ATGTCTGCCCATATCATAGTGTTCCCTTTTTTTGGGCAAGGCCATCTCCTCCCTTGCATTGAGCTCTGCAGACACCTCGCCTCCCGCACCTTCAACACCACCCTCATCATCTCCTCCAATCTCTCCTCCTCCATCCCCTCCGATCTCCGCCGTATTCCTCTCTTCCACATCTTTGAGATCTCATCCTCATTACCTCCTCCTCCTCCGCCATCGTCGCCCTCCCCGGATTCCGATCCCATGAGCCACCACCATCCCCACCACCAGCAGATGGGTACGGCCATCGAATCCCTCCTCTCTTCCAGATCCACATCCCCAGACTACGTCCCACCCCTCTGTGCCATAATCGATGTGATGATGAGCTGGAGCAAAGATATTTTTCATAAGTTTAACATCCCAGTCGTTTCTTTCTTCACCTCCGGTGCCTGCTCCGCTGCCATGGAGTACGCCTCCTGGAAAGCCGGCGCCTTTAACATCAAGCCCGGCGAAGTCCTACCCCTTCCCGGCCTACCCGAAGACATGGCCTTGACTTACTCCGACCTTCAACGCGGCCCTCACGGTCCTCCTGGCGGCCCACCTGGACCCCCCGGTTCAGGAGGCCCACCTGGACCACCCGGTGCAAGAGGACCACCACGGTCGGGTCCCAAGTTCGGGGGGCCACCCAAACCGGGGCACCAGCCACCGTGGGTCGACGAGACAGCGGGCTCGATCGCGCTTATGATCAACACGTGTGACGACCTGGAGCGTCCGTTCATCGAGTACGTGGCCCACCAAACCGGAATCCCGGTCTGGGGTGTGGGCCCGCTTTTGCCAGATCAGTACTGGAAGTCATCCGGTTCGCTCCTCCACGATCGGGACATCCGACCCAACAAGAAATCCAGCTGCACTGAGGAGGAGGTGATCCAGTGGCTAGACTCCAAGCCCCGTGGATCCGTCCTGTACGTGTCATTCGGAAGCGAGGTAGGTCCTACCATGGAGGGCTACGCCCAACTGGCGCTTGCATTAGAAGCCTCGAACCGGCCATTCATCTGGGTGATCCAACCCGGTTCAGGCCGGCCAGGTCCACCTCGACGACCGGGTTCAGACTCAAACGAAGACAGCGGATACTACCCAGATGGATTGGAGGAGAAAGTAGGAAAAAGAGGTCTGATAATACGTGGGTGGGCACCACAACTGTTGATACTGAGTCACCCATCGACAGGTGGATTTCTATCACACTGTGGATGGAACTCCACTGTGGAGGCAATAGGGCGTGGAGTGCCCTTTTTGGCTTGGCCAATCCGTGGAGACCAGTACTCCGATGCGATGCTAGTGGTGAAACATCTCAAAATTGGGTACATGGTGTTTGCTAAAGATGCTTCTGAAAATATCGTAAAAGAGGCCATAGTTGACGGAATAGAGAAGGTGATGAGTGATAAAGACATGAAGAAAAGGGCGGAGACGATAAGTGGTAAGTTTGGGAATGGGTTTCCGGCGACTTCGGCTGCTGCTTTGGATGCTTTTAGGGATTTTATCAACCAAAGGGCTCCATAA 1530 0.5575 MSAHIIVFPFFGQGHLLPCIELCRHLASRTFNTTLIISSNLSSSIPSDLRRIPLFHIFEISSSLPPPPPPSSPSPDSDPMSHHHPHHQQMGTAIESLLSSRSTSPDYVPPLCAIIDVMMSWSKDIFHKFNIPVVSFFTSGACSAAMEYASWKAGAFNIKPGEVLPLPGLPEDMALTYSDLQRGPHGPPGGPPGPPGSGGPPGPPGARGPPRSGPKFGGPPKPGHQPPWVDETAGSIALMINTCDDLERPFIEYVAHQTGIPVWGVGPLLPDQYWKSSGSLLHDRDIRPNKKSSCTEEEVIQWLDSKPRGSVLYVSFGSEVGPTMEGYAQLALALEASNRPFIWVIQPGSGRPGPPRRPGSDSNEDSGYYPDGLEEKVGKRGLIIRGWAPQLLILSHPSTGGFLSHCGWNSTVEAIGRGVPFLAWPIRGDQYSDAMLVVKHLKIGYMVFAKDASENIVKEAIVDGIEKVMSDKDMKKRAETISGKFGNGFPATSAAALDAFRDFINQRAP* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0961 509 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 289 481 IPR002213 GO:0008194
Vvi2g0961 509 MobiDBLite consensus disorder prediction 346 371 - -
Vvi2g0961 509 MobiDBLite consensus disorder prediction 185 226 - -
Vvi2g0961 509 CDD GT1_Gtf-like 3 500 IPR002213 GO:0008194
Vvi2g0961 509 Gene3D Glycogen Phosphorylase B; 285 482 - -
Vvi2g0961 509 Gene3D Glycogen Phosphorylase B; 1 188 - -
Vvi2g0961 509 FunFam Scopoletin glucosyltransferase 1 189 - -
Vvi2g0961 509 MobiDBLite consensus disorder prediction 63 89 - -
Vvi2g0961 509 MobiDBLite consensus disorder prediction 178 230 - -
Vvi2g0961 509 Gene3D Glycogen Phosphorylase B; 234 284 - -
Vvi2g0961 509 FunFam Glycosyltransferase 297 487 - -
Vvi2g0961 509 PANTHER GLYCOSYLTRANSFERASE 3 484 - -
Vvi2g0961 509 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0961 Vvi-Chr2 13674127 13675656 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0961 2 483 Glycosyltransferase AT2G36780 28.629 1.76e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0961 - - vvi:104882568 887.871