Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0958 ATGGTGGCATCGAAGGTGGTGTACGAGGGATGGATGGTGCGGTGCGGACGGAGGAAGATCGGCAGATCCTACATCCATATGCGGTATTTCGTGTTGGAGTCGCGTCTGCTTGCTTACTATAAGAGAAAGCCTCAGCATAATGTGGTTCCGATCAAGACGCTTCTAATTGATGGGAATTGTAGGGTGGAAGACAGAGGGTTGAAGACTCACCATGGATATATGGTTTATGTTTTGTCTATTTACAACAAGAAGGAGAAGTACCATCGAATCACGATGGCAGCATTCAATATCCAGGAGGCATTACTCTGGAAAGAAAAAATTGAGTCTGTAATTGATCAGCATCAGGACTTACAAGTTGCTAATGGAAATAAATATATTTCATTTGAATATAAATCTGGGATGGATAATGGAAGGGCTGCTTCCTCATCAGACCATGAAAGTCAGTTTAGTGCACAGGATGATGAAGAAGATACTCATCGTGATTTGGTTCGGAGAAAAACAATTGGAAATGGTATTCCTGACTCAGTGCTTGACTGGACTCGAGAAATAGATTCAGAATTGTCAAACCAGAATATCAACAATCAAGCCTTTTCCAGAAAGCATTGGCGTCTTCTCCAGTGCCAAAATGGACTTCGAATTTTTGAAGAGCTTCTTGAAGTTGATTACCTTCCAAGGAGCTGTAGTAGAGCAATGAAAGCTGTAGGGGTTGTGGAGGCAACCTGTGAAGAAATATTTGAGCTTGTAATGAGCATGGATGGAAAACGGTTTGAGTGGGATTGCAGTTTCCAAGATGGCAGCTTAGTGGAGGAGGTAGATGGACATACGGCTATTCTCTATCATAGGCTTCAGCTGGATTGGTTCCCTATGTTTGTGTGGCCTCGTGACCTTTGCTATGTGCGTTATTGGCGTCGAAATGATGATGGAAGCTATGTTGTGTTATTTCGTTCTAGGGAGCACGAGAACTGTGGTCCACAACCAGGATTTGTGCGTGCCCATCTTGAAAGTGGGGGATTCAACATTTCCCCTCTAAAACCTCGAAATGGGAGGCCCAGAACACAGGTTCAGCATCTTCTGCAAATTGATCTGAAAGGATGGGGTGCTGGTTATATTTCATCTTTTCAGCAACATTGTCTCCTTCAGGTGTTAAATAGTGTTGCTGGACTGCGTGAGTGGTTTTCCCAGACGGATGAAAGGAATGCTCAACCAAGAATTCCTGTTATGGTCAATATGGCCTCAGCTTCTGTTACTTCAAAGAAGAATCAGAAGCCACAGGAGTATTCTGATCAATCAAATGCTACAGGTAGGAACTCAATGATGATGGATGAAGACTCTGATGAAGATGAAGAATTTCAAGTACCTGAGAGAGAACAAGAGGCATACTCAATGAGTCTTCAGAATGAAGTCAAGGGAACAGCCATGGAAGAAGAACCCCAAGATAAAATTGATGTCTCATGTTTTTCGGGTAATCTACGACGTGATGACCGTGATAAGGGTCGTGACTGTTGGACGATATCTGATGGGAACAACTTCAGAGTTCGTTGCAAGCATTTTTTTTATGACAAAACGAAGATTCCTGCAGGGAAACATCTTATGGATCTTGTTGCTGTTGATTGGTTCAAAGACTCAAAACGGATCGACCATGTTGCTAGGCGACAAGGCTGTGCAGCACAAGTTGCATCAGAGAAAGGACTTTTCTCTATCATCATAAACCTCCAAGTACCCGGTTCAACACACTACAGTATGGTATTTTATTTTGTAAGTAAGGAATTAGTAACTGGATCCCTGTTGCAACGATTTGTTGATGGTGATGATGAATTCCGAAATAGCAGGCTGAAACTCATCCCATCAGTTCCCAAGGGTTCATGGATTGTGCGCCAGAGTGTTGGAAGCACCCCTTGTTTATTAGGAAAAGCAGTTGATTGCAATTATATCCGTGGTCCAAAGTACTTGGAGATTGATGTTGACATTGGTTCTTCAACTGTTGCCAATGGAGTTTTGGGCCTTGTATGTGGTGTAATTACAACATTGGTTGTTGACATGGCTTTCCTTGTACAGGCAAACACGGTGGATGAGTTGCCGGAGAGGTTGATTGGCGCCGTCCGGGTTTCCCATGTAGAGCTTTCATCAGCTATAGTCCCAAAATTGGACCCAGATACATGTGCTTGA 2166 0.4326 MVASKVVYEGWMVRCGRRKIGRSYIHMRYFVLESRLLAYYKRKPQHNVVPIKTLLIDGNCRVEDRGLKTHHGYMVYVLSIYNKKEKYHRITMAAFNIQEALLWKEKIESVIDQHQDLQVANGNKYISFEYKSGMDNGRAASSSDHESQFSAQDDEEDTHRDLVRRKTIGNGIPDSVLDWTREIDSELSNQNINNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGKRFEWDCSFQDGSLVEEVDGHTAILYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCGPQPGFVRAHLESGGFNISPLKPRNGRPRTQVQHLLQIDLKGWGAGYISSFQQHCLLQVLNSVAGLREWFSQTDERNAQPRIPVMVNMASASVTSKKNQKPQEYSDQSNATGRNSMMMDEDSDEDEEFQVPEREQEAYSMSLQNEVKGTAMEEEPQDKIDVSCFSGNLRRDDRDKGRDCWTISDGNNFRVRCKHFFYDKTKIPAGKHLMDLVAVDWFKDSKRIDHVARRQGCAAQVASEKGLFSIIINLQVPGSTHYSMVFYFVSKELVTGSLLQRFVDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVVDMAFLVQANTVDELPERLIGAVRVSHVELSSAIVPKLDPDTCA* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0958 721 SMART START_1 182 394 IPR002913 GO:0008289
Vvi2g0958 721 CDD START 194 365 - -
Vvi2g0958 721 MobiDBLite consensus disorder prediction 137 160 - -
Vvi2g0958 721 CDD PH 8 107 - -
Vvi2g0958 721 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 715 IPR045096 -
Vvi2g0958 721 ProSiteProfiles PH domain profile. 5 112 IPR001849 -
Vvi2g0958 721 Pfam START domain 228 367 IPR002913 GO:0008289
Vvi2g0958 721 MobiDBLite consensus disorder prediction 414 446 - -
Vvi2g0958 721 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 502 705 IPR009769 -
Vvi2g0958 721 SMART PH_update 6 114 IPR001849 -
Vvi2g0958 721 Gene3D - 202 404 IPR023393 -
Vvi2g0958 721 MobiDBLite consensus disorder prediction 414 438 - -
Vvi2g0958 721 SUPERFAMILY PH domain-like 4 116 - -
Vvi2g0958 721 Gene3D - 2 121 IPR011993 -
Vvi2g0958 721 ProSiteProfiles START domain profile. 202 364 IPR002913 GO:0008289
Vvi2g0958 721 SUPERFAMILY Bet v1-like 185 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0958 Vvi-Chr2 13478823 13525251 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0958 - - vvi:100246589 1467.98