Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0955 ATGGCATCCATGGCACACCTCCGCCTTGCTCTCTACACTCCAAGACTCGTCCCACCGCCAAGAAACTTAAGAAGACCCTCCAAAATTAAGTCCCAGGGCGGCGCCCCCGCTGACACTCCCGGCACCGCCACCGCCTTCTCTGCCAGCAAATGGGCCGATCGCCTCCTCAGCGACTTCCAGTTCCTCCCTCCGCCACCCGCCACCACCGCCGCTTCCGACCGTTCCACCGAGCTGACATCACTCCCGCCTCCCCCACTCGCTCCTCCGGAGCGCGATGTGTCTATTCCGCTCCATTTCTACCAGGTCTTGGGCGCTGAGGCCCATTTTCTTGGTGATGGTATCAGACGAGCGTACGAAGCAAGGGTTTCGAAGCCGCCTCAGTACGGGTATTCTCAGGAGGCATTGATAAGCCGGAGGCAGATTCTTCAGGCGGCTTGCGAGACCCTAGCGAACCCTAGGTCGAAGAGAGAGTACAGTCAAGGTCTGGCCGAAGATGAGGTGGAAACGATTATCACCCAAGTGCCTTGGGATAAGGTTCCTGGGGCGTTGTGTGTGCTGCAAGAAGCAGGAGAGAATGAGATAGTGCTTCACATTGGAGAAAGTTTGCTTAGAGAAAGGTTGCCCAAATCTTTCAAGCAAGATGTTGTGTTGGCGATGGCACTCGCCTATGTTGACTTGTCTAGAGATGCAATGGCATTGTCTCCTCCTGATTTTATTAAAGGTTGTGAAGTGCTTGAGAGGGCTTTGAAGCTGTTGCAGGAGGAAGGAGCCAGCAGCCTTGCGCCAGATTTACAAGCACAGATAGATGAGACATTGGAAGAGATCACTCCACGTTGTGTTTTGGAACTTCTGGCTTTGCCCCTTAGTGATGAATACAGGACAAGAAGAGAAGAGGGTCTTCAAGGTGTTCGTAACATTTTATGGGCCGTTGGAGGTGGTGGAGCGGCTGCAGTAGCTGGGGGGTTCACCCGTGAGGATTTTATGAATGAAGCCTTCTTATGTATGACAGCAGCTGAGCAGGTTAATCTATTTGCAGCTACCCCAAGTAATATCCCAGCAGAAAGTTTCGAGGTTTATGGAGTGGCACTTGCACTTGTTGCTCAAGCCTTTGTGGGTAAAAAGCCTCATCTCATCCAAGATGCTGACAACCTGTTCCAACAACTTCAGCAGACGAAGATAATGACCCCGGGGAACCCTGTCTCTGCATATACTCCTGGACAGAACTCCGAGATAGACTTTGCTTTGGAAAGGGGTCTCTGTTCATTGCTTGTGGGAGAGATTGATGAATGTCGCTCATGGTTGGGATTAGACAATCATAGCTCACCATACAGAGATCCATCTATTGTAGAGTTTGTTTTGGAGAACTCCAAGGATGACCATGATAATGATCTACTTCCAGGGCTGTGTAAACTTCTGGAGACATGGTTGATGGAGGTGGTTTTCCCCAGATTTAGAGATACTAAATGTGTCCAGTTCAAGCTTGGAGATTATTATGATGATCCTACGGTCCTGAGATATCTTGAGAGGCTGGAGGGAGTTGGTGGATCACCATTAGCTGCAGCTGCAGCCATTGCAAGAATTGGAGCTGAGGCTACTGCAGTCCTTGATAATGTTAAGGCTAGTGCAATTCAGGCACTGCAGAAGGTGTTTCCTGTTGATCACGGAAATGAGAATTTGAGACGTGAAGATAGTGGGATAAATAATTCCGTTCCTGTTGTAGAAAGTGAGGAGCCTTTGCAAAATCCTGCTAGAGATGATTCTGCCAACATAGCTGAAATTCCTAAGGAAAATAGTTCTGATGAAATATATGAACAAAAATTAATTACCGAAAAAATAAAAGATGCAAGTGTGAAGATCATGTGTGGTGGTGTGGTGGTTGGACTGATGACTTTGATTGGCTTGAAGTATTTACCAGCTAAGAATAACTCATCCATTCTACGTAAGGAAGTTGGTTCAGCAATGGCATCTGATGTCACCAATGTGGGGTTGGTTGAAAATTCTGAGGAAGTACCCAGAATGGATGCAAGATTTGCTGAAGGTCTAGTTCGCAAGTGGCAGAGCATTAAATCTCAGGCTCTTGGACCCGATCATTGCCTTGGAAAATTGCCAGAGGTTCTTGATGGTCAGATGTTGAAGATTTGGACAGATCGTGCAGCTGACATAGCACAGCACGGCTGGTTCTGGGAATACACTTTGCTAAACCTGACAATTGACAGTGTCACCGTCTCACTAGATGGGCGACGTGCCATGGTGGAGGCAACTCTAGAGGAGTCAGCCCGCCTAACTGACACTGTGCATCCAGAGCACAATGACTCATACAGCACAACCTACACAACAAGGTATGAGATGTCCTGTAATAGCTCAGGATGGAAAATTACTGAAGGAGCTGTGCTCAAGCCCTAG 2403 0.484 MASMAHLRLALYTPRLVPPPRNLRRPSKIKSQGGAPADTPGTATAFSASKWADRLLSDFQFLPPPPATTAASDRSTELTSLPPPPLAPPERDVSIPLHFYQVLGAEAHFLGDGIRRAYEARVSKPPQYGYSQEALISRRQILQAACETLANPRSKREYSQGLAEDEVETIITQVPWDKVPGALCVLQEAGENEIVLHIGESLLRERLPKSFKQDVVLAMALAYVDLSRDAMALSPPDFIKGCEVLERALKLLQEEGASSLAPDLQAQIDETLEEITPRCVLELLALPLSDEYRTRREEGLQGVRNILWAVGGGGAAAVAGGFTREDFMNEAFLCMTAAEQVNLFAATPSNIPAESFEVYGVALALVAQAFVGKKPHLIQDADNLFQQLQQTKIMTPGNPVSAYTPGQNSEIDFALERGLCSLLVGEIDECRSWLGLDNHSSPYRDPSIVEFVLENSKDDHDNDLLPGLCKLLETWLMEVVFPRFRDTKCVQFKLGDYYDDPTVLRYLERLEGVGGSPLAAAAAIARIGAEATAVLDNVKASAIQALQKVFPVDHGNENLRREDSGINNSVPVVESEEPLQNPARDDSANIAEIPKENSSDEIYEQKLITEKIKDASVKIMCGGVVVGLMTLIGLKYLPAKNNSSILRKEVGSAMASDVTNVGLVENSEEVPRMDARFAEGLVRKWQSIKSQALGPDHCLGKLPEVLDGQMLKIWTDRAADIAQHGWFWEYTLLNLTIDSVTVSLDGRRAMVEATLEESARLTDTVHPEHNDSYSTTYTTRYEMSCNSSGWKITEGAVLKP* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0955 800 MobiDBLite consensus disorder prediction 18 42 - -
Vvi2g0955 800 Pfam ARC6-like, IMS domain 678 793 IPR025344 -
Vvi2g0955 800 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 36 799 IPR044685 -
Vvi2g0955 800 MobiDBLite consensus disorder prediction 62 90 - -
Vvi2g0955 800 SUPERFAMILY Chaperone J-domain 97 162 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0955 Vvi-Chr2 13419847 13425871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0955 - - vvi:100251728 1546.56