Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0947 ATGTCTTCACCTGTTAGAGCCACCGTTGTTCAAGCTTCTAGTATCTTTTTTGATACTCCTGCCACTCTAGATAAGGCTGAGAAATTGTTAAAAGAAGCAGCTGCACTGGGATCCCAACTGGTTGTGTTTCCTGAAGCATTTATCGGTGGGTATCCCCGCGGACACAACTTCGCCGACCAGTCACCAAGAGGGAAAGAAAGTTTCCGCAAGTACCATGCTTCTGCCATTAATGTGCCGGGACCTGAAGTTGATAGATTGGCTTCAATGGCTAGGAAATACAAAGTCTACATAGTGACGGGCGTTATTGAGAGAGATGGATACACATTGTATTGCACTGTTCTCTTCTTTGATCCAGAAGGCAATTACCTTGGAAAACATAGGAAACTCATGCCAACATATCGGGAACGGCTCGTCTGGGGTTTTGGAGATTGCTCGACAACTCCAGTTTATGACACTCCATATGGAAAACTTGGTTCGGTCATTTGTTGGGAAAATAGAATGCCGCTGCTAAGGACAGCAATGTATGGCAAAGGTATTGAGATATATTGTGCTCCTTCGGCCGATTCCGGGGATACATGGGTAGCTACAATGAGACACGTCGCTATGGAGGGTGGATGCTATGTTCTTTCACCCATCCAATTCTGTCGGAGGAAAGATTACCCGCCTCCACCTGAGTATCTTTACAGTCCTACAGAAGAAGATGTCACTCCAGATTCTATTGTTTGGGCTGGAGGTAGTGTCATCATTTCACCCACCGGGGAAGTTCTAGCAGGACCCAATTATGAAGGAGAAGGCCTCTTCACAGCTGATCTTGATGTTCGAGGAGAGATTCCTAAAGCAAAGTTCATGTTCGATGTGGTAGGACATTATTCGAGACCTGACGTGCTAAGTCTCACTGTGAACAATCGTCCACTGCTTCCTGTTACTTTCACATCCTCACCATCTAAAATCAAAGACGATGAGATGGATGAATGCAAAGATGTATAA 987 0.4529 MSSPVRATVVQASSIFFDTPATLDKAEKLLKEAAALGSQLVVFPEAFIGGYPRGHNFADQSPRGKESFRKYHASAINVPGPEVDRLASMARKYKVYIVTGVIERDGYTLYCTVLFFDPEGNYLGKHRKLMPTYRERLVWGFGDCSTTPVYDTPYGKLGSVICWENRMPLLRTAMYGKGIEIYCAPSADSGDTWVATMRHVAMEGGCYVLSPIQFCRRKDYPPPPEYLYSPTEEDVTPDSIVWAGGSVIISPTGEVLAGPNYEGEGLFTADLDVRGEIPKAKFMFDVVGHYSRPDVLSLTVNNRPLLPVTFTSSPSKIKDDEMDECKDV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0947 328 Gene3D - 1 286 IPR036526 -
Vvi2g0947 328 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 5 273 IPR003010 GO:0006807
Vvi2g0947 328 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 37 52 IPR000132 GO:0003824
Vvi2g0947 328 CDD nitrilases_CHs 5 301 IPR044149 GO:0003824
Vvi2g0947 328 FunFam Bifunctional nitrilase/nitrile hydratase NIT4B 1 286 - -
Vvi2g0947 328 Pfam Carbon-nitrogen hydrolase 6 273 IPR003010 GO:0006807
Vvi2g0947 328 PANTHER NITRILASE 3 314 IPR044149 GO:0003824
Vvi2g0947 328 SUPERFAMILY Carbon-nitrogen hydrolase 3 301 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0947 Vvi-Chr2 13235398 13237513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0947 K13035 - vvi:100240765 669.077