Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0946 ATGGTGTGGGAGACATCACATGGTGAGCCATTTCTTAAAACTTGCATGTCAAAGTTCAAATGCATTAAGATGCTAGATTTATCGTATTCGAACTTTGACACATTGCCAAATTCTATCAGTAATCTAAAGCATCTCAGACTTTTCAACCTCAGTTGGAATGAGAGGATAAAGAAACTTCCAAATTCAATATGCAAGTTGTTTCATCTGCAAAGGTTGTCGCTTTTCAAATGTGAGGGATTCGAGAATCTGCCCAAGGAGTTTGGGAACCTCATCAGTTTGAGGAATTTATGCATCACCACGAAACAGAAGGCTTTGACAGGGATAGGATGCCTAGAATCTCTTCGTATTTTAAGGATTTATGAATGTGAAAATCTAGAATTTCTGCTTCAAGGGACGCAAAGCCTTACTACTCTTCGGTCATTGGCTATTGGCGGTTGTAGGAGTTTGGAGACTTTGGCACCTAGCATGAAACAACTGCCCTCGTTAGAGCATCTCATGATTTTCGATTGTGAAAGGCTTAATTTACTGGATGGAAATGGGGAAGACCACGTTCCAGGGCTCGGGAATCTACGAGTTTTGATGCTTGGAAAATTACCAAAGTTGGAGGCATTGCCAGTGTGTAGCCTCACATCCCTTAACAGACTTGTGATTAGAGAATGCCCTCAATTGATTGAAAGATGCAAGACAACAATAGGGGAGGATTGGCATAAAATCTCTCATGTCTCAAAGATATATATTGATGGCTTCAAAACACCAGAAAATTAA 765 0.4026 MVWETSHGEPFLKTCMSKFKCIKMLDLSYSNFDTLPNSISNLKHLRLFNLSWNERIKKLPNSICKLFHLQRLSLFKCEGFENLPKEFGNLISLRNLCITTKQKALTGIGCLESLRILRIYECENLEFLLQGTQSLTTLRSLAIGGCRSLETLAPSMKQLPSLEHLMIFDCERLNLLDGNGEDHVPGLGNLRVLMLGKLPKLEALPVCSLTSLNRLVIRECPQLIERCKTTIGEDWHKISHVSKIYIDGFKTPEN* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0946 254 Gene3D Ribonuclease Inhibitor 4 250 IPR032675 -
Vvi2g0946 254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 14 96 - -
Vvi2g0946 254 SUPERFAMILY RNI-like 12 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0946 Vvi-Chr2 13229560 13230324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0946 14 216 Receptor kinase-like Gene Family AT4G13920 27.619 6.27e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0946 - - vvi:109121990 425.246