Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0943 ATGGCAACTCTCTTAGACAGGCTCAAGGATTCCCTCGCTCTCACACTCGACCATTTCTGTCCACATGCAGGCCACCTTGCAACAAAGAAGGAGGATAGTTTCCCCTCTTACATGGTATTTGCAGATTATAACAACAGTCCCGGAGCGCAATTCATCCACGCGGCTGCAGACATGACAATATCTGACATCCTTTCATCAATTTATATACCCCAAGTTCTCCAATCATTCTTTGATCATGATAGGGTAATTAATCACGATGGTCACACCTTGTCTTTGCTATCAATTCAAGTCACAGGGCTTGTGGATGGCATCTTCATTGGATGTTCCAAAAATCATGGCATGGTTGATGGAACCTCTTTCTAG 363 0.4408 MATLLDRLKDSLALTLDHFCPHAGHLATKKEDSFPSYMVFADYNNSPGAQFIHAAADMTISDILSSIYIPQVLQSFFDHDRVINHDGHTLSLLSIQVTGLVDGIFIGCSKNHGMVDGTSF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0943 120 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 120 - -
Vvi2g0943 120 Gene3D - 1 120 IPR023213 -
Vvi2g0943 120 Pfam Transferase family 6 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0943 Vvi-Chr2 13170362 13170724 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0943 - - vvi:109124176 246.899