Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0938 ATGGCATCCCAATTAATCCGTGAATGGACTGGGATTCAACAATTCCCCCCTGTTACACAGACCAAATTGATTGAACTGCTGGGAAAACTAAAGCAGGAGAATGTGAGCACATTGACAATCCTTGTAATGGGGAAAGGTGGTGTTGGAAAATCTTCAACTGTAAACTCAATCATAGGGGAAAGAGCAGTTGCTGTCAGTGCTTTTCAGTCAGAAGGACCAAGGCCTGTTATGGTTTCACGGTCCCGAGCAGGATTCACATTGAACATTATTGACACACCAGGGCTTGTAGAAGGGGGATATGTCAATGATCAGGCACTTGAGATCATAAAACGATTTCTTCTAAACAAGACCATAGATGTTCTACTCTATGTGGACCGATTAGATGCATATAGGGTAGACAACTTGGATAGGCAGGTTGTCAAAGCTATAACTGATAGTTTTGGCAAAGAAATATGGCGAAGAGGTGTGGTTGTCCTTACACATGCTCAACTCTCTCCACCAGATGGGTTAAATTATGAGGATTTCTTCTCCAAAAGATCAGAGGCTCTCATGAAAGTTGTTCGATCGGGAGCTCGGTTAAGGAAGCAGGATATCCAGGATTCTGGCATTCCTGTTGTTCTGGTCGAGAATAGTGGGAGATGTCATAAGAATGAAAGTGATGAAAAGATTCTGCCAAATGGAACTGCTTGGATCCCCAATTTAGTCAAAACAATCACAGATGCTGTGTCAAATGGAAGCAAGGGTATTTTGGTTGACAAGAAGTTGATTGAAGGGCCGAACCCAAACGAGAGAGGAAAGTTACTCATTCCTTTTATTTTAGCCTTCCAATACTTCTTTATCGTGAAACGAATTCAACGGGCAATCAAAAGTGATATGGCAAAGGAGAGAAAAGCTCCATGGGAGTCGCGGGAGGCCAACCGTTATGAACCTTGA 933 0.4287 MASQLIREWTGIQQFPPVTQTKLIELLGKLKQENVSTLTILVMGKGGVGKSSTVNSIIGERAVAVSAFQSEGPRPVMVSRSRAGFTLNIIDTPGLVEGGYVNDQALEIIKRFLLNKTIDVLLYVDRLDAYRVDNLDRQVVKAITDSFGKEIWRRGVVVLTHAQLSPPDGLNYEDFFSKRSEALMKVVRSGARLRKQDIQDSGIPVVLVENSGRCHKNESDEKILPNGTAWIPNLVKTITDAVSNGSKGILVDKKLIEGPNPNERGKLLIPFILAFQYFFIVKRIQRAIKSDMAKERKAPWESREANRYEP* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0938 310 Gene3D - 2 267 IPR027417 -
Vvi2g0938 310 ProSiteProfiles AIG1-type G domain profile. 35 259 IPR006703 GO:0005525
Vvi2g0938 310 Pfam AIG1 family 38 228 IPR006703 GO:0005525
Vvi2g0938 310 FunFam Translocase of chloroplast 2 268 - -
Vvi2g0938 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 257 IPR027417 -
Vvi2g0938 310 NCBIfam GTP-binding protein 1 306 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vvi2g0938 310 CDD Toc34_like 7 252 - -
Vvi2g0938 310 PIRSF Toc33/toc34 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vvi2g0938 310 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 37 217 IPR045058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0938 Vvi-Chr2 13004490 13007871 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0938 - - vvi:100257906 609.372