Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi2g0915 | ATGTCTAGCATGGACACATTGAAGAGACATCTTCCTATTTCTGGACCAGAGGGACTTAATGAGCTAAGGAAAATTGTTGAAAGGTTTGAGGAAAAGATTTATTCTACTGCCACAAGCCAGTCTGATTACCTTTGA | 135 | 0.3926 | MSSMDTLKRHLPISGPEGLNELRKIVERFEEKIYSTATSQSDYL* | 45 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0915 | 44 | Gene3D | Coactivator CBP, KIX domain | 1 | 44 | IPR036529 | GO:0003712|GO:0006355 | |
| Vvi2g0915 | 44 | FunFam | Uncharacterized protein | 1 | 44 | - | - | |
| Vvi2g0915 | 44 | Pfam | KIX domain | 3 | 44 | IPR036546 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi2g0915 | Vvi-Chr2 | 11773816 | 11774120 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi2g0915 | - | K14972 | vri:117908489 | 81.6481 |