Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0904 ATGGGAGTTTCAGGTGATGAAGAGGGTGCTCGCCATGGGCCATCTTTGACGCCTGGAGGTTCATCTAAGGCTCACAAGAACATAGAAGATATCCTTCTTAAAAGGGCTGCCCAAGTTTCTGATAATAGCTTCGGTGTGACTTACATTGGCAGAGGGGGTTCTGGAAATTTCATTAAGATGGTTCAAAATGGTATTGAATATGGTGATATGTAG 213 0.4366 MGVSGDEEGARHGPSLTPGGSSKAHKNIEDILLKRAAQVSDNSFGVTYIGRGGSGNFIKMVQNGIEYGDM* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0904 70 Gene3D - 54 70 IPR013328 GO:0016491
Vvi2g0904 70 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 53 70 IPR008927 -
Vvi2g0904 70 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 41 IPR036291 -
Vvi2g0904 70 Gene3D - 1 53 - -
Vvi2g0904 70 PANTHER 6-PHOSPHOGLUCONATE DEHYDROGENASE 1 70 IPR006183 GO:0004616
Vvi2g0904 70 MobiDBLite consensus disorder prediction 1 24 - -
Vvi2g0904 70 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 1 40 IPR006115 GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0904 Vvi-Chr2 11598096 11598308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0904 K00033 - bvg:104896287 114.775