Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0902 ATGTCATGCTTTGTGCAATTGTGTCATACAGTGCTAGATCAGGTTCACATTTTTGTTCAACCGACAGTGAGTCGTGTGGTAAGCAGACTCAAATATATATGTAATATGGAAGGCCTAAAGACAAATTCCACGGCACTTGCTGCACTTGTAGAGTATACTGAACTTTGTTTCTATTTTCCAAAATGTGACATCCGTTCGTGCTTGAACACACTGCAGTTTCTCAACAAGAAGAATCAAACCCTCAATGTGTTTGAGATCAGTTCCCAAGTGGTAGGTCAAAAGGACATGTCTAGAAGCATCTTTGATATCAGGAAAGAGAACAGAAAAATGAAGCGAGCAAAAAGATCTGATAATTGCTGCAGTGGTATGTCCAATGGATTTGACTTTCTGTACCCTCTCATATCTAATCGTGGTGACTATGATTTAATTTTGGATGGCATCCATGAAAATATTTTCCAGCTTCATTATCATGACCCAATAATGGCATTAAGTAAATCTTGCTTAAACACTCTTGGCATTTTTGATCTAGTGCACCAATATGTTATGCGTACACAGCAGATGTCCCTTAATGTTTATCAGCCTCTTACTGCAATTAGTTTACATCATTTAATAGCCCAAGTTCAAAAACCAATTATTGAATGGCCGAAGTCTTTTATGAGATACCGAATGACATTCATGGAAAAGAGGGATATTTTGAGGTCTTGGCACAACAAAATTGCACCATATATTTCAAGGCATCTGTCTATTAAATCTTTTGTAGAAGATTCGGTTTCTCCATTATTGCATATTCTATCACCACCAACTCTAAGATCGGTGGCATTGCACTTACTATCAGAAAGAGAAAGGAATGACCTAGCTCAGTTAATTAATGCTATGGTGTCCTATTCAATAACATACAAGAACATGAAATCTGATCCTCTACATGGTACCCAGCTATATGAAGCAACTTCAGATGGCTTGTCACTTTCCTTTGATCCCCCAATTGTTGACTTTGTCACCTTCAAGGTTTAA 1011 0.3759 MSCFVQLCHTVLDQVHIFVQPTVSRVVSRLKYICNMEGLKTNSTALAALVEYTELCFYFPKCDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKDMSRSIFDIRKENRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHENIFQLHYHDPIMALSKSCLNTLGIFDLVHQYVMRTQQMSLNVYQPLTAISLHHLIAQVQKPIIEWPKSFMRYRMTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHILSPPTLRSVALHLLSERERNDLAQLINAMVSYSITYKNMKSDPLHGTQLYEATSDGLSLSFDPPIVDFVTFKV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0902 336 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 14 335 - -
Vvi2g0902 336 CDD HLD_clamp_RFC 21 83 - -
Vvi2g0902 336 Gene3D - 21 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0902 Vvi-Chr2 11554981 11575642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0902 K11269 - vvi:100244400 581.637