Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0897 ATGGGTAAACCACATATTCTAGTTGTACCTCTTCCAGCGCAAGGCCATGTACTTCCTCTAATGGAGCTGTCTCTATGCTTAGCCAAACAAGGGTTGAGAGTCACATTTGTGAACACAGAGTTCATTCATGAGAGGCTGGTGAATGCATTGATGGAGAGGGATAACTTAGGAGATCAATTCCGTCTGGTTTCGATCCCAGATGGATTGACCGATGCCGACAGAATTATTCCAGGGAAGTTAAGTGAAGCAATCTGGGGGATTATGGGCGAGAAGCTGGAGGAGCTCATTGGAATGATCAAAAGAGCTGGTGATGACGTCTCTTGCGTGGTAGCCGATCGGGGTGTGGGCAGTGCCCTGGAAGTTGCCGCAAAGATGGGAATTCGGCGAGCTGCTTTCTGTCCCATAGCAGCCATATTCACGCCCTTGGTATTTAGCATTCCCAAGCTCATTAATGATGGAATCATAGATAACGAAGGAACTCCAATAAAGGGCCAGGAGATTCAATATTTGCCAACCAATATTCCTGCCATTAATACTAAAGACTTCCCGTGGGTTCGGAATGGTAACTTAACCATGCAGAAACTTATGTTTAAACTTATAGTGAGAAATAACGAAGCTGTGAAAAAGGCAGACTGGCTGATTTGCAACTCAGCTTATGATTTAGAGCCTGCAGCATTTGCCTTGGCTCCGGAGATCATACCCGTAGGCCCACTCTTGGCACGCAATCGGCTTGGTAATTCGGCAGGAAGCTTGTGGCCAGAAGATTCGACTTGTTTGAAATGGCTAGATCAACACCCACCCTGCTCTGTCATATATGTTGCTTTTGGCAGTATGACAATTTTTAACGAGAAGCAGTTCAAGGAACTGGCACTGGGACTTGAACTCTCCAACATGCCATTTCTGTGGGTTGTGAGACCAAATAGTATTGACTGTACCAAGGTTGCCTACCCAGAGGGATTTCAAGACAGAATAGCCAACCGGAGGAAGATTGTGGGCTGGGCTCCTCAGCAGAAAGTTCTGAGTCATCCTTCTGTTGCTTGCTTCTTAAGCCACTGTGGTTGGAATTCTACCATAGAAGGTGTAAGCAATGGGGTCTCTTTCTTGTGCTGGCCTTACTCAGTCGACCAGTTTCTTAACGAGAGATACATTTCTGATGTTTGGAAGGTTGGATTGGGGTTTAATCCAGACGAGAGGGGGATCATCACGCGTGAGGAAATTAAACATAAGGTGGAGCAGCTGCTTGGTGACGAAAATTTTAGGATAAGGGCTTCAAATCTGAAGGAATCGGCCATGAATTGCGTGAGAGAAGGTGGCTCTTCCTATAATAATTTCCAGCGTTTCATTCAATGGCTGAAGGCATAA 1362 0.4596 MGKPHILVVPLPAQGHVLPLMELSLCLAKQGLRVTFVNTEFIHERLVNALMERDNLGDQFRLVSIPDGLTDADRIIPGKLSEAIWGIMGEKLEELIGMIKRAGDDVSCVVADRGVGSALEVAAKMGIRRAAFCPIAAIFTPLVFSIPKLINDGIIDNEGTPIKGQEIQYLPTNIPAINTKDFPWVRNGNLTMQKLMFKLIVRNNEAVKKADWLICNSAYDLEPAAFALAPEIIPVGPLLARNRLGNSAGSLWPEDSTCLKWLDQHPPCSVIYVAFGSMTIFNEKQFKELALGLELSNMPFLWVVRPNSIDCTKVAYPEGFQDRIANRRKIVGWAPQQKVLSHPSVACFLSHCGWNSTIEGVSNGVSFLCWPYSVDQFLNERYISDVWKVGLGFNPDERGIITREEIKHKVEQLLGDENFRIRASNLKESAMNCVREGGSSYNNFQRFIQWLKA* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0897 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 451 - -
Vvi2g0897 453 PANTHER GLYCOSYLTRANSFERASE 4 447 - -
Vvi2g0897 453 FunFam UDP-glycosyltransferase 83A1 250 432 - -
Vvi2g0897 453 CDD GT1_Gtf-like 4 430 IPR002213 GO:0008194
Vvi2g0897 453 Gene3D Glycogen Phosphorylase B; 8 444 - -
Vvi2g0897 453 FunFam UDP-glycosyltransferase 83A1 8 249 - -
Vvi2g0897 453 Gene3D Glycogen Phosphorylase B; 247 432 - -
Vvi2g0897 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 420 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0897 Vvi-Chr2 10849905 10851759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0897 1 453 Glycosyltransferase AT3G02100 47.863 4.53e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0897 - - vvi:100242099 926.391