Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0893 ATGATTCGTCAAAACGATCCGAACCCGTTCGATGAGGAAGAGGTCAATCCATTCTCGGTTGCTACTGCTCCTGGATCAAGGTCGCGCGTTCCTCCAGCTGCGTCTGCAAACCTGGGATTTAATGACAAATATGATGCTACTGTAGATATTCCATTGGACACACTGAATGATTCTAACAAAAAAGAGAAAGAACTTGCAGCTTGGGAGGCTGATTTGAAACGGAAAGAAAAGGACATAAAACGGAGGGAAGATGCTGTGTCAAAAAAGGGGATCCCAACTGAGGATAAAAACTGGCCTTCGTTCTTTCCTATTATCCATAATGATATAGCCAATGAAATACCGGTTGATGCTCAAAGGTTGCAGTATTTGGCTTTTGCAAGTTGGTTAGGAATAGTTCTTTGTCTTGTATTCAATATTATCGCAGTGACTGTTTGTTGGATTAAAGGCGGGGGTGCCAAAATCTTTTTGCTTGCAATCATCTATGCTTTGGTTGGATGCCCCCTTTCATATGTGCTGTGGTATAGGCCTCTCTATCGTGCAATGAGGACGAATAGTGCTCTGAACTTTGGTTGGTTTTTCCTGGTGTACGCTATACACATTTGTTTTTGTATAGTTGCTGCTATTGCTCCTCCAATTGTCTTTGAAGGGAAGTCATTGACGGGCATCCTTTCAGCAATTGATTTGTTCTCTGACCATGTGCTTGTGGGGATTTTCTACTTAATTGGGTTTGCCTTGTTTTGCTTAGAGATGCTTCTAAGCTTATGGGTGATTCAGAAAGTTTATTTGCGTTTCAGAGGGAGGAAGTGA 807 0.4213 MIRQNDPNPFDEEEVNPFSVATAPGSRSRVPPAASANLGFNDKYDATVDIPLDTLNDSNKKEKELAAWEADLKRKEKDIKRREDAVSKKGIPTEDKNWPSFFPIIHNDIANEIPVDAQRLQYLAFASWLGIVLCLVFNIIAVTVCWIKGGGAKIFLLAIIYALVGCPLSYVLWYRPLYRAMRTNSALNFGWFFLVYAIHICFCIVAAIAPPIVFEGKSLTGILSAIDLFSDHVLVGIFYLIGFALFCLEMLLSLWVIQKVYLRFRGRK* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0893 268 Coils Coil 58 85 - -
Vvi2g0893 268 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 7 267 IPR007273 GO:0015031|GO:0016020
Vvi2g0893 268 MobiDBLite consensus disorder prediction 1 35 - -
Vvi2g0893 268 Pfam SCAMP family 96 266 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0893 Vvi-Chr2 10652606 10716519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0893 1 268 Miscellaneous Gene Families AT1G32050 70.741 1.75e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0893 K19995 - vvi:100262642 533.872