Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0890 ATGCACGTTTATTGCGAGACATGTCAACGTTTCTTAGCTGATCGGCTTGTGGAAGGCACCTGCCCAACACTAGATTGTAATTACGACTCTGCTCATGGGGATCAGTGCGAAAAGTGTGGAAAGCTATTGAATCCAACTGAACTGAAAGATCCTAGATGCAAGGTATGCCAGTCTACTTCACAAATTCGTGATATAGACCACTTGTTTCTCGAGCTCCCATTAATCCCGCTTGGGGGGTTCCTGTTCCACATGAAAAATATAAAGACAAGGTTTTCTATGTCTAGTTTGATGCACCAATTGGTTATGCCTCAATCACTGCATGCTATACACCTGAGTGGGAAAAGTGGTGGAAGAACCCTGAAAATGTGGATCTGTACCAGTTTATGGGCAAGGATAATGTGCCATTCCACACTTGATGTTCCCATCTACACTTATTGGAACTGGAGAAAATTGGACATTGATGAAGAGCATTAG 474 0.4304 MHVYCETCQRFLADRLVEGTCPTLDCNYDSAHGDQCEKCGKLLNPTELKDPRCKVCQSTSQIRDIDHLFLELPLIPLGGFLFHMKNIKTRFSMSSLMHQLVMPQSLHAIHLSGKSGGRTLKMWICTSLWARIMCHSTLDVPIYTYWNWRKLDIDEEH* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0890 157 Pfam tRNA synthetases class I (M) 3 73 IPR015413 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Vvi2g0890 157 PANTHER METHIONINE--TRNA LIGASE 3 75 IPR023458 GO:0004825
Vvi2g0890 157 Gene3D - 1 90 - -
Vvi2g0890 157 SUPERFAMILY Methionyl-tRNA synthetase (MetRS), Zn-domain 17 53 IPR029038 -
Vvi2g0890 157 FunFam Methionine--tRNA ligase 17 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0890 Vvi-Chr2 10573744 10587498 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0890 K01874 - vvi:100253638 151.369