Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0889 ATGAAGGAAATGAGTCAACGGGTGGACTCAAATTTGTGGCCTCGTGTATTTTGTAGTGGTGGCAGAGTTACACAGATTCAAGTTAAGGGATTGGGATTAAAGGGACCTCTCCCTCAGAACTTCACCCAGCTTTCAATGCTCTGCAATTCGGGGTTTCAGATGAACCATTTCAATGGAAAATTGCCTTCTTCTCACAGATTGTCCGAATTGCAATTCGCCTTCTTGGATTACAACGAAGTCGACACCATCTCCATTGGTTTCTTTGATGGCCTTACAAGTATTCAGATCCTCGCTCTGAATGATAATCCGTTCAATGCAACTACTAGTTTACATTATTTGAAGGGACAATAA 351 0.4188 MKEMSQRVDSNLWPRVFCSGGRVTQIQVKGLGLKGPLPQNFTQLSMLCNSGFQMNHFNGKLPSSHRLSELQFAFLDYNEVDTISIGFFDGLTSIQILALNDNPFNATTSLHYLKGQ* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0889 116 PANTHER OSJNBA0070M12.3 PROTEIN 9 106 - -
Vvi2g0889 116 Gene3D Ribonuclease Inhibitor 3 115 IPR032675 -
Vvi2g0889 116 SUPERFAMILY L domain-like 9 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0889 Vvi-Chr2 10556395 10556745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0889 13 78 Receptor kinase-like Gene Family AT5G16590 38.806 3.28e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0889 - - vvi:100253071 163.31