Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0881 ATGGCCGCTTTGCAATACCTGGAATCACTGCGCGCGGCCCATCCGGAGCTGGCAGAATGGTACAACTCTCTTGCAGATCTGTACCAGAGGAAGCTCTGGCACCAACTCACTCTCAAACTCGAACAGTTCGTCGCTCTTGCAGTCTTTCAGGCGGGTGATGCTCTCATTCAGTTATATCATAATTTTATCACTGACTTTGAGACTAAGATCAATCTTCTCAAGCTCGCACATTTTGCTGTCATAGTTTCTAGGCAGTATACAGAGAAAGAAGCTGCTGTACGTTACCTTGAAGGGGTAATTGAAAAGCTTCGAGGTACTAGAGAGTTACGTATAGAGGAGCCCATTCTATACATAAAGATGCAAATAGCTGTTTTCAATCTTGAGAAGGGGGACCAAAAAGAGTGCAAGAAACTTTTAGAAGATGGGAAGAGTACACTTGACAGTATGACTGACATTGATCCTTCTGTATATGCCAGCTATTATTGGGTTTCATCTCAGTATTATAAATCTCGTCAAGAATTCGCAGAATTCTATAAAAGTGCTCTTCTATATCTGGCATACACATCAGTGGAGTCTCTCTCTGAAACATTTAAGCTGGATTTGGCATTTGATTTATCGCTTTCTGCGCTGCTGGGAGATAATATCTATAACTTTGGAGAACTGCTTGCTCATCCAATTATAAAAAGTCTTCTGGGGACAAAGGTTGAGTGGCTTTACTATATACTCCAGGCATTCAACTCTGGTGATTTAGTCCGCTATCAAGAATTATGCCGTGTCCATAATGCTGCTCTGAGTGCTCAACCGGCATTAGTTCAGAATGAGAAGAAGCTACTGGAAAAGATTAACATTCTCTGCTTGATGGAAATCATCTTCAGCCGTCCTTCAGAAGATCGTACTATTCCCTTGAACATCATTGCAGAACGCACCAAACTTTCTGTGGAGGATGTGGAGTATCTTCTCATGAAGAGCCTTTCTGTTCATCTTATTGAGGGCATCATTGATCAAGTTGAAGGGACAGTTCATGTGTCGTGGGTGCAGCCAAGAGTTTTGGGTATTCCACAGATCAAATCGTTGCGCGACCGACTTGACAATTGGGTGGACAAAGTGCACACTGCTTTGCTCTCTGTGGAGGCAGAAACACCTGATCTAGTTGCATCATGA 1161 0.4298 MAALQYLESLRAAHPELAEWYNSLADLYQRKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYTEKEAAVRYLEGVIEKLRGTRELRIEEPILYIKMQIAVFNLEKGDQKECKKLLEDGKSTLDSMTDIDPSVYASYYWVSSQYYKSRQEFAEFYKSALLYLAYTSVESLSETFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCRVHNAALSAQPALVQNEKKLLEKINILCLMEIIFSRPSEDRTIPLNIIAERTKLSVEDVEYLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIPQIKSLRDRLDNWVDKVHTALLSVEAETPDLVAS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0881 386 Gene3D - 220 343 - -
Vvi2g0881 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 4 385 IPR035298 -
Vvi2g0881 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 IPR000717 -
Vvi2g0881 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Vvi2g0881 386 SUPERFAMILY "Winged helix" DNA-binding domain 275 348 IPR036390 -
Vvi2g0881 386 Pfam PCI domain 238 343 IPR000717 -
Vvi2g0881 386 FunFam 26S proteasome non-ATPase regulatory subunit 13 homolog B 174 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0881 Vvi-Chr2 10270255 10293877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0881 K03039 - vvi:100252379 749.199