Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0878 ATGGCATCTGGTACCATTTTATCTGCATCTTACTGGTCTGCATGGAGTGCCAGAGAAGCAGCTAATGAGCAGGACAAGCTATTAAAGGATGCTTCAGATGAGTTTCTAAGTACAGAGGGCACTGGTTCTAGTGGTATGGCGGATATCAACACGACATCAGCAGTTCTTTTTGTTGTGATCGCTTCATGTTTCTTGGTTATGCTTTATAAATTTATTTCATTCTGGTTTGTTGAGGTTCTGGTGGTTCTGTTTCGCATTGGTGGGGTAGAGGGCCTTCAGACTTGCTTGGTGGCTTTGTTATCTTGTTTCAGATGGTTTGAACAAGCTGCAGAATCATTTGTTAAGGTGCCATTCTTTGGAGCCGTCTCATATCTGACTTTGGCTATGTCTCCATTCTGCATAGCATTTGCTATTGTTTGGGCAGTTTTTTTTCGCCGCATCAACTTAGCTTAG 453 0.426 MASGTILSASYWSAWSAREAANEQDKLLKDASDEFLSTEGTGSSGMADINTTSAVLFVVIASCFLVMLYKFISFWFVEVLVVLFRIGGVEGLQTCLVALLSCFRWFEQAAESFVKVPFFGAVSYLTLAMSPFCIAFAIVWAVFFRRINLA* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0878 150 PANTHER SIGNAL PEPTIDE PEPTIDASE 1 145 IPR007369 GO:0004190|GO:0016020
Vvi2g0878 150 Pfam Signal peptide peptidase 45 143 IPR007369 GO:0004190|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0878 Vvi-Chr2 10259625 10260077 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0878 K09597 - vvi:100259203 298.516