Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0869 ATGGCTGTGGTGGCTTCTGCTCCTGGAAAGGTCTTGATGACTGGGGGTTACCTAATTTTGGAGAGACCCAATGCAGGAATAGTGCTCAGCACAAATGCTCGATTTTATGCTATTGTGAAACCCCTGCGCGAAGATATCGAGCCTGATAGCTGGGCTTGGGCATGGACAGATGTGAAATTAACATCTCCTCAGCTCTCCAGAGAAACTATGTACAAAATGTCACTAAAAAATTTAATGCTCCAATGTGTTTCTTCAAGTGAATCAAGGAATCCTTTCGTTGAGCAAGCAGTGCAATACACTATAGCAGCTGCACGTGCAACACTTGACAAGAATAATAATGATTTTTTACACACAAAACTCTTACAAGGTCTTGATATTACAATCTTAGGTTGCAATGATTTTTATTCATACAGGAATTATATTGAAGCACGTGGACTCCCTTTGACACCAGATGTGTTGGCTGCCCTTCCGCCTTTTACACCAATTACCTTTAATGCAGAGGAATCAAATGGAGAGAATTGCAAACCTGAAGTGGCAAAAACTGGACTGGGTTCATCTGCAGCAATGACAACATCAGTGGTTGCTGCTTTACTTCATTACTTTGGAGTTGTTAATTTATCTTCATTGAATAAAGATCAACACCAAGAAAAAGATTGTGTGGATCTTGATTTGGTGCATGTGATAGCTCAAAGTGCTCACTGCATTGCACAAGGGAAAGTTGGCAGCGGTTTTGATGTCAGCTCTGCAGTTTATGGCAGTCAACGATATGTCCGGTTTTCCCCGGAAGTCCTTTCTTCTGCTCAGGTTGCAGTGAAAGGACTGCCCATACAAGAAGTCATTCATGATATACTAAAAGGAAATTGGGACCATGAAAGGACTAAATTTTCCTTGCCACCGTTGATGACTCTTTTGCTAGGAGAACCAGGCGCTGGAGGTTCATCAACACCATCAATGGTAGGTGCTGTAAAGAAGTGGCAAAAGTCTGACCCTGAGAAGTCCCTAGAAACATGGAGAAAGTTGTCAGCGGCAAATTCAGCACTTGAAACACAATTCAAGATTTTGAGTAAATTAGCAGAGGAAAATTGGGATGCATATAAATGTGTGATCAACAGTTGCAGCATTCATAGGTCAGAGAAGTGGATGGAGCGAGCCACTGGGCCAGACCAAGAAGCAGTTGTTAATGCATTGTTAGCAGCAAGAGATGCAATGCTTAGGATCAGAAGTAATATGCGCCAGATGGGTGAGGCTGCAGGCATCCCGATAGAACCCAATTCTCAAACTCGGCTTTTGGATGCTACTATGGACATGGAAGGAGTTCTATTGGCTGGAGTTCCAGGAGCAGGTGGATTTGATGCAATTTTTGCTGTCACCTTAGGGGATTCAAGTAGCAACATAACCAAAGCATGGACTTCGCTCAATGTGCTGGCTATGCTAGTCAGAGAAGACCCTCATGGTGTTTCTTTAGAAACTGGTGATCCACGAGCCCAGCAAATTACATCAGCCATTTCTTCAGTTCACATAGAATGA 1527 0.4303 MAVVASAPGKVLMTGGYLILERPNAGIVLSTNARFYAIVKPLREDIEPDSWAWAWTDVKLTSPQLSRETMYKMSLKNLMLQCVSSSESRNPFVEQAVQYTIAAARATLDKNNNDFLHTKLLQGLDITILGCNDFYSYRNYIEARGLPLTPDVLAALPPFTPITFNAEESNGENCKPEVAKTGLGSSAAMTTSVVAALLHYFGVVNLSSLNKDQHQEKDCVDLDLVHVIAQSAHCIAQGKVGSGFDVSSAVYGSQRYVRFSPEVLSSAQVAVKGLPIQEVIHDILKGNWDHERTKFSLPPLMTLLLGEPGAGGSSTPSMVGAVKKWQKSDPEKSLETWRKLSAANSALETQFKILSKLAEENWDAYKCVINSCSIHRSEKWMERATGPDQEAVVNALLAARDAMLRIRSNMRQMGEAAGIPIEPNSQTRLLDATMDMEGVLLAGVPGAGGFDAIFAVTLGDSSSNITKAWTSLNVLAMLVREDPHGVSLETGDPRAQQITSAISSVHIE* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0869 508 NCBIfam phosphomevalonate kinase 4 494 IPR016005 GO:0004631
Vvi2g0869 508 Pfam GHMP kinases C terminal 402 469 IPR013750 -
Vvi2g0869 508 Pfam GHMP kinases N terminal domain 174 253 IPR006204 GO:0005524
Vvi2g0869 508 Gene3D - 1 307 IPR014721 -
Vvi2g0869 508 Gene3D - 309 477 IPR036554 -
Vvi2g0869 508 PANTHER - 1 496 IPR035102 -
Vvi2g0869 508 PIRSF PMK_GHMP_euk 1 498 IPR016005 GO:0004631
Vvi2g0869 508 FunFam Probable phosphomevalonate kinase 1 307 - -
Vvi2g0869 508 SUPERFAMILY Ribosomal protein S5 domain 2-like 2 262 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0869 K00938 - vvi:100242124 997.653