Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi2g0866 | ATGATAACGGAGGACGCCTTGCTGACGTATCAGACGATGATCAATACGCTTGATGGGGTGAGAGATGAGATGGGCGCGAGTGCGAGCCCTTGGGCCAAGTGGACCCGGTCATGGACGGCGGAGGAGAATCGCCACGGGGATCTGTTGAGAACCTATCTCTATCTTTCTGGTCGGGTTGATATGCGTATGATTGAGAGGACGGTGTAG | 207 | 0.5459 | MITEDALLTYQTMINTLDGVRDEMGASASPWAKWTRSWTAEENRHGDLLRTYLYLSGRVDMRMIERTV* | 69 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0866 | 68 | Gene3D | Ribonucleotide Reductase, subunit A | 1 | 68 | IPR012348 | GO:0016491 | |
| Vvi2g0866 | 68 | Pfam | Fatty acid desaturase | 1 | 68 | IPR005067 | GO:0006631|GO:0045300 | |
| Vvi2g0866 | 68 | PANTHER | ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED | 1 | 68 | IPR005067 | GO:0006631|GO:0045300 | |
| Vvi2g0866 | 68 | FunFam | Uncharacterized protein | 1 | 68 | - | - | |
| Vvi2g0866 | 68 | SUPERFAMILY | Ferritin-like | 1 | 67 | IPR009078 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi2g0866 | Vvi-Chr2 | 9563110 | 9563316 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vvi2g0866 | 1 | 68 | Acyl Lipid Metabolism Gene Families | AT1G43800 | 88.235 | 1.73e-37 | 126 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi2g0866 | K03921 | - | vvi:100255873 | 137.502 |