Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0862 ATGGCGCTTTTAGAAGGGTCATTGAACACAGCCATTGGGGCGAGCCTTCTTCTGGTCATACGCCTACTACCTCTCTCACTTCCTCCACATGTTCCGCACATACTTCACCATATTAGGACATCCGGTTATACCCTGTTGCGGGATCCACACCACAACAAAGGGCTTGCCTTCACTGAGAAGGAGAGAGATGCCCATTACTTGCGTGGACTTTTGCCCCCAGCAGTCCTGAATCAGGATCTTCAGGAGAAGAGATTGATGCACAATCTTCGCCAATATAAAGTTCCATTGCAAAGGTACATGGCTATGATGGATTTTCAGGAGAGGAATGAAAGGTTGTTTTACAAGCTCCTTATTGATAATGTTGAGGAATTGCTCCCAGTTGTCTACACTCCAACAGTTGGTGAGGCTTGCCAGAAATACGGGAGCATTTTCAGGCGTCCTCAGAGTCTTTACATCATTGACTTTTTCATGGGAAAGATACTAGAAGTGCTGAAAAACTGGCCTGAAAGGAGTATTCAAGTTATTGTCGTAACTAATGGTGAACGTATTTTAGGGCTTGGGGATCTTGGCTGCCAAGGAATGGGAATACCTGTGGGAAAACTTTCTTTATATACAACACTAGGTGGACTACATCCTTCAGTATGCTTGCCTGTAACCATAGATGTTGGCACAAACAATGAGCAACTGTTGAAGGATGAGTTCTACATTGGACTCAAGCAAAGGAGGGCAACTGGGCAGGAATATGCCGAGCTTCTACATGAGCTAATGTGTGCAGTTAAACAGAACTATGGGGAGAGGGTCCTTATACATGTCAATTTTGCAAACCACAATGCATTTGAGCTGCTCGCAAAATATAGCAAAACTCATCTTGGTACAACATCTGTGGTCCTAGCAGAGCTAATTGCTTCTCTAAAACTAGTAGGCGGGAGCTTAGCTGAGCTTACTTTCCTGTTTCTTGGTGCTGGAGAGGCTGGAACTGGCATAGCAGAGCTCATAGCTCTTGAGATATCAAAACAGACAAAAGCTCCATTGGAAGAGACCCGTAAGAAGATTTGGCTTGTCAACTCAAAGGGACTGATTGTTCACTCTCGCATGGAATCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAGCATGAACCTATTAGGGCACTTGTAGATGCAGTCCAGTCTATCAAGCCGACAGTGTTGATAGGATCACTTGGAATAGGGAAAACATTTACCAAGGAGGTGGTTGAGGCCATGACATCCTTCAATTTTTTAACCTTGCTTATTTGTATGACATTGTTGATTCTTTGA 1299 0.4419 MALLEGSLNTAIGASLLLVIRLLPLSLPPHVPHILHHIRTSGYTLLRDPHHNKGLAFTEKERDAHYLRGLLPPAVLNQDLQEKRLMHNLRQYKVPLQRYMAMMDFQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQSLYIIDFFMGKILEVLKNWPERSIQVIVVTNGERILGLGDLGCQGMGIPVGKLSLYTTLGGLHPSVCLPVTIDVGTNNEQLLKDEFYIGLKQRRATGQEYAELLHELMCAVKQNYGERVLIHVNFANHNAFELLAKYSKTHLGTTSVVLAELIASLKLVGGSLAELTFLFLGAGEAGTGIAELIALEISKQTKAPLEETRKKIWLVNSKGLIVHSRMESLQHFKKPWAHEHEPIRALVDAVQSIKPTVLIGSLGIGKTFTKEVVEAMTSFNFLTLLICMTLLIL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0862 432 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 30 287 IPR046346 -
Vvi2g0862 432 Gene3D - 291 427 - -
Vvi2g0862 432 Gene3D - 40 290 IPR037062 GO:0004471
Vvi2g0862 432 Pfam Malic enzyme, N-terminal domain 106 285 IPR012301 GO:0004471
Vvi2g0862 432 FunFam Malic enzyme 40 292 - -
Vvi2g0862 432 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 291 418 IPR036291 -
Vvi2g0862 432 SMART malic_2 106 286 IPR012301 GO:0004471
Vvi2g0862 432 Pfam Malic enzyme, NAD binding domain 291 418 IPR012302 GO:0051287
Vvi2g0862 432 FunFam Malic enzyme 291 427 - -
Vvi2g0862 432 PIRSF ME 24 422 IPR001891 GO:0004470|GO:0004471
Vvi2g0862 432 SMART Malic_M_2 291 431 IPR012302 GO:0051287
Vvi2g0862 432 PRINTS Malic enzyme signature 112 136 IPR001891 GO:0004470|GO:0004471
Vvi2g0862 432 PRINTS Malic enzyme signature 316 332 IPR001891 GO:0004470|GO:0004471
Vvi2g0862 432 PRINTS Malic enzyme signature 172 201 IPR001891 GO:0004470|GO:0004471
Vvi2g0862 432 PRINTS Malic enzyme signature 208 230 IPR001891 GO:0004470|GO:0004471
Vvi2g0862 432 PANTHER MALIC ENZYME-RELATED 37 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0862 Vvi-Chr2 9406992 9411582 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0862 K00029 - vvi:100249166 690.263