Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0859 ATGGTTATGTGGCATTGTTTGTTCGGATGCTTTGGGCTAGATAATGATCCTCTCGATAGGGAATTGGCAGTAGTAGCATTGTGGAAATATTCACTTGGGGAAAAGCAGTATATTGATGCCATAATGCAATTCCGAGGCTGCTTAAACCTCACAGTAAATCTCCTTAAATCAGACTCCCGTTCTACTTGTGAAGCAGCTGCAGGTCTTCTACGAGAAATAGCTTCAGTTAATCCATATAGAAAGTCAGTAGCAGAAAGTGGGGCACTAGAATAG 273 0.4176 MVMWHCLFGCFGLDNDPLDRELAVVALWKYSLGEKQYIDAIMQFRGCLNLTVNLLKSDSRSTCEAAAGLLREIASVNPYRKSVAESGALE* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0859 90 Gene3D - 5 90 IPR011989 -
Vvi2g0859 90 SUPERFAMILY ARM repeat 14 89 IPR016024 -
Vvi2g0859 90 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0859 Vvi-Chr2 9393480 9393752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0859 - - vvi:100255981 142.124