Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0848 ATGGATGTAGAAGCTATGGGCAGAGAAGCACAAAAGTATGTTTGGGAAGGGGCTATTCCCCTCCAGATTCATCTCCATGAATCCGAAGTCACCACTCTTCCTCATCCTTCTCCTGCTCTTGTCTTAGCACCTCGGATGGGGTACTTACCTTTGTTACTTCCTCTACTCAAGCCACACTTCAGTAGCACACTTCCACCTGGTGTAGATACTATTTGGTTTGAGTATAAAGGTTTGGCACTCAAATGGCATATACCAACAGGAGTTCTTTTTGATCTTCTATGTGCAGAACAAGAAAGACCTTGGAATTTGACGGTACATTTTAGAGGATACCCCGGTAATATTTTGACTCCATGCGAAGGTGAAGATAGTGTTAAGTGGAGCTTTATTAACTCATTGAAAGAGGCAGCATATATAGTCAATGGGAACTGCAAGAATGTAATGAACATGTCACAATCTGATCAGATGGAGCTCTGGCACTCTGTGTTAAACGGTAATATGGAGGCCTACCAACGGGTTTCATCTAAGCTTAAACTTGAAAAAGTTGGAGATCAGTATGTAGGGAAACCAAATTCAAACTTATTAAAATCTCGAACAAACACCGGTGAAACGGATACTGGTGGACCAGTCAAGACAGGTAGAATTCCAGTTCGTTTGTATGTTTGGAGTGTGAGCAAGGATTTTGATGATTTAGAAGATGCACCTCAAATTGATAGTTGGGACCAAATCTCTTACATGAACCGACCTGTTGAGATTCACAGAGAAGAAGGTAAACTCAGACAAATGCTTCACCTTACGTGA 798 0.416 MDVEAMGREAQKYVWEGAIPLQIHLHESEVTTLPHPSPALVLAPRMGYLPLLLPLLKPHFSSTLPPGVDTIWFEYKGLALKWHIPTGVLFDLLCAEQERPWNLTVHFRGYPGNILTPCEGEDSVKWSFINSLKEAAYIVNGNCKNVMNMSQSDQMELWHSVLNGNMEAYQRVSSKLKLEKVGDQYVGKPNSNLLKSRTNTGETDTGGPVKTGRIPVRLYVWSVSKDFDDLEDAPQIDSWDQISYMNRPVEIHREEGKLRQMLHLT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0848 265 MobiDBLite consensus disorder prediction 189 206 - -
Vvi2g0848 265 PANTHER AUTOPHAGY PROTEIN 5 6 262 IPR007239 GO:0005737|GO:0006914
Vvi2g0848 265 FunFam Autophagy protein 5 111 178 - -
Vvi2g0848 265 FunFam Autophagy protein 5 6 110 - -
Vvi2g0848 265 Gene3D - 6 110 IPR042527 -
Vvi2g0848 265 MobiDBLite consensus disorder prediction 189 209 - -
Vvi2g0848 265 Gene3D Autophagy protein Apg5, helix rich domain 111 180 IPR042526 -
Vvi2g0848 265 Pfam Autophagy protein Apg5 82 260 IPR007239 GO:0005737|GO:0006914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0848 K08339 - vvi:100249011 529.25