Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0845 ATGTTAAACTCCACAGATTCTGAATCAAGGACTGATTCAGATAATGAAGATGACGTTAATCAACTAGACAGTAGTGGCGAAGTTTCCAGCCAATCTTCTAGTGACCAAGAAGAATGTATTAAAGATTCTGTTGAGAAGCATTGGAAACATCTCAATAAGTTTGTTGAGACTGTTAAGAGCAATGGTTTAAGCTTGTCAGCCACTAAGATTAACCTATATCAAACTAAAGTAAGATTCCTAGGTCATCATATTCACCAAGGAACATTCACCCCCATTCAAAGATCAATTGAGTTTGCTGATAAGTTCCCTGATGAGACTAAAGATAAGAAACAATTGCAACGTTTCTTAGGAAGCCTTAATTATGTGTTAGACTTCATACAAGATTTAAGCCAATTATGTGCCCCTTTAAGACAAAGACTTAAGAAAAATCCAGTTCCTTGGAATGAGGATCATACCAAGATTGTTAAAATAGTAAAGTCTAGAGTTAAAACCTTACCATGTCTCGCCTTAGCTGATCATAAAGCCTTTAAGATTGTTGAGACTGATGCTTCTGACATAGGTTTTGGTGGAATTCTTAAGCAAAGAAGTAATAATCAAGAATTGTTGGTTAGATTCACTTCTGGAACTTGGAACCATGCCCAACTCAACTACAGCACCATCAAAAAGGATATTTTAAGCATCGCTAGGTGCAGGACCCTTGAAAAAAGGCTAGAAATAGCTAATTTTCCCAAAGAAGATATAAGCTAA 747 0.3601 MLNSTDSESRTDSDNEDDVNQLDSSGEVSSQSSSDQEECIKDSVEKHWKHLNKFVETVKSNGLSLSATKINLYQTKVRFLGHHIHQGTFTPIQRSIEFADKFPDETKDKKQLQRFLGSLNYVLDFIQDLSQLCAPLRQRLKKNPVPWNEDHTKIVKIVKSRVKTLPCLALADHKAFKIVETDASDIGFGGILKQRSNNQELLVRFTSGTWNHAQLNYSTIKKDILSIARCRTLEKRLEIANFPKEDIS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0845 248 Gene3D - 97 183 IPR043128 -
Vvi2g0845 248 MobiDBLite consensus disorder prediction 1 36 - -
Vvi2g0845 248 SUPERFAMILY DNA/RNA polymerases 42 230 IPR043502 -
Vvi2g0845 248 Pfam RNase H-like domain found in reverse transcriptase 147 230 IPR041577 -
Vvi2g0845 248 Gene3D - 38 90 IPR043128 -
Vvi2g0845 248 MobiDBLite consensus disorder prediction 22 36 - -
Vvi2g0845 248 PANTHER POL PROTEIN 36 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0845 Vvi-Chr2 9107062 9115010 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0845 - - cann:124897154 246.128