Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0838 ATGACTGTTGCCTTGGATCGAATTTTCCTGGATGTAGAGGATCCTTTTGTGTTCGAACCTCATCACAAAGCACTGCGAGAGCCCTTTGACTATTACATGTTTGGCCAAAATTATATCCGGCCTTTGGTTGATTTCAGCAATTCATATGTTGGCAACATCTCCCTTTTCTGTGATATGGAAGAGAAGCTTCAGCAGGGTCACAATATTGTCCTGATTTCCAACCATCAAACAGAAGCAGACCCAGCTGTCATTGCCTTGTTGCTTGAATCAACAAATCCACTTATTGCTGAGAACATGATCTATGTAGCTGGAGATAGGGTTGTAACAGATCCTCTTTGCAAGCCCTTCAGCATGGGAAGGAATCTCTTGTGTGTGTACTCAAAAAAGCACATGAATGATGTCCCTGAACTTGCTGAGATGAAAAGAAGAGCAAACACACGAAGTTTAAAGGAAATGGCTTTGCTTCTAAGGGCTGGATCACAAATAATATGGATTGCACCAAGTGGGGGTAGGGACCGTCCTGATCCTCTGACCAAAGAATGGCACCCAGCACCCTTTGATGCATCTTCAGTGGATAATATGAGAAGGCTTGCAGAACATTCTGGGGTTCCAGGGCATATTTATCCCTTAACATTGATGTGTCATGACATCATGCCTCCTCCTCTCCAGGTAGAAAAAGAAATTGGGGAGAAAAGATTGATCTCTTTTCATGGGACCGGATTATCAGTGGCACCAGAAATTAAATTCCATGAAATTGCTGGTTCCTATGAAAACCCTGATGAGGCTAAGGAGGCTTATACACAAGCTTTCTATAATTCTGTTGTTGAGCAATACTATGTACTCAATTCTGCTATACATGGAAAACAAGGTCTAGGGGCATCAACGCCAACTGTTTCATTGTCACAACCATGGAATTAG 918 0.4259 MTVALDRIFLDVEDPFVFEPHHKALREPFDYYMFGQNYIRPLVDFSNSYVGNISLFCDMEEKLQQGHNIVLISNHQTEADPAVIALLLESTNPLIAENMIYVAGDRVVTDPLCKPFSMGRNLLCVYSKKHMNDVPELAEMKRRANTRSLKEMALLLRAGSQIIWIAPSGGRDRPDPLTKEWHPAPFDASSVDNMRRLAEHSGVPGHIYPLTLMCHDIMPPPLQVEKEIGEKRLISFHGTGLSVAPEIKFHEIAGSYENPDEAKEAYTQAFYNSVVEQYYVLNSAIHGKQGLGASTPTVSLSQPWN* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0838 305 CDD LPLAT_GPAT 47 281 - -
Vvi2g0838 305 Pfam Acyltransferase 59 210 IPR002123 GO:0016746
Vvi2g0838 305 PIRSF G3POAT 1 305 IPR016222 GO:0004366|GO:0006650
Vvi2g0838 305 Gene3D - 15 296 - -
Vvi2g0838 305 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 1 305 IPR016222 GO:0004366|GO:0006650
Vvi2g0838 305 SMART plsc_2 69 215 IPR002123 GO:0016746
Vvi2g0838 305 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 1 304 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0838 1 305 Acyl Lipid Metabolism Gene Families AT1G32200 73.115 1.62e-176 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0838 K00630 - vvi:100264363 626.706