Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0823 ATGGACTTGGGGCTCCGGCGGGTGGACCACACCGTGGGTAACGTGCCGGAGCTGGCGCCGGTGGTCGCGTACTTGAAGCAATTAAATGGATTTCACGAGTTGGCAGAGTTCGCGGCGGAGGACGTGGGAACTAGCGAGAGTAGGCTAAACTCGGTGGTGTTAGCCAACAACAATGAGATGGTGTTGCTGCCATTGAATGAGCCGGTGTTTGGTGCAAAGAGAAAGAGGCAGATACAGACGTATTTGGAGCACAATGAGGGGGCTGGAGTGCAGCATTTGGTGCTGATGAGCGACAATATTTGCAGGACACTGCGGGAGATGAGGCGGCGCAGCGGGGTTGGGCGCTTCGAGTTCATGCCCTCGCCACTACCAACTTACTACCGTAATATGAAGAAGAGGGCTGGGAATGTGCTGACGGATGATCAAATTAAAGAGTGTGAGGACTTGGGGATTTTGGTGGATAAGGATGATCAAGGTACCTTGCTCCAGATTTTAACCAAGCCTTTGGATGATAGGCCCACAATATTTATTGAGATGATTCAGAGATTAGGGTGTATGGTGAAGGATGATGAAGGGAAGGTGGTTGGGTGTGGAGGGTTTGGGAAAGGCAACTTTTCAAAACTTTTCAAATCCATTGAAGAGTATGAGAAGACTCTTGAAGCCAAGCGAATTGCAGAAACTTCTTGTGTCTCCTTGATCCATAATTCTCTTTGA 714 0.4944 MDLGLRRVDHTVGNVPELAPVVAYLKQLNGFHELAEFAAEDVGTSESRLNSVVLANNNEMVLLPLNEPVFGAKRKRQIQTYLEHNEGAGVQHLVLMSDNICRTLREMRRRSGVGRFEFMPSPLPTYYRNMKKRAGNVLTDDQIKECEDLGILVDKDDQGTLLQILTKPLDDRPTIFIEMIQRLGCMVKDDEGKVVGCGGFGKGNFSKLFKSIEEYEKTLEAKRIAETSCVSLIHNSL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0823 237 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 7 167 IPR037523 -
Vvi2g0823 237 Gene3D - 3 223 IPR029068 -
Vvi2g0823 237 FunFam 4-hydroxyphenylpyruvate dioxygenase 3 223 - -
Vvi2g0823 237 CDD HPPD_C_like 5 214 IPR041735 -
Vvi2g0823 237 PANTHER 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE 2 221 IPR005956 GO:0003868|GO:0009072|GO:0016701
Vvi2g0823 237 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 3 209 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0823 Vvi-Chr2 8633135 8634435 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0823 K00457 - vvi:100248785 382.489