Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0817 ATGGAAACAAAACTCGAAAAGGTATTGGATAGTAAAAGCAGAATTGTGGTTGGCTGGAAGAGGAAGCGGGCGGCTCAGTATGCAGCACACTTATCTGCTTTGAACTCAAAGAAAAATAGGCTTTGCAAGCGGAGAAAATTAGATGGGTATAGAATGAATTATGGGCCTAATTTTGAAAAATCTTTGCTTAAAGGTTATTCAAATTTTATGAAAACTGAGCTGCCACAACGCATAATGTTTTATGTAAATGGTGACTGGAAAGATTTCCCTCAAAATATCATTACCTTGGTGAGGAAAGATTTTCAGGTCAGGAAGTCATATACTGAGGTTGAACTCAATGGTAATTGCTTTATGCTAGACTTCATGCACATGGTACGGGTAGATATGAAAACAGGTTTACAGCAACCTATTGCTTGGATTGATGAAGCTGGTAACTGCTTCATTCCAGAAACTTTCTCAGGGGAAGATGAAATTCATTACTGCTGCAGGCATGAATATGGTAAAGATCAACAGCTCTTTTTTGGGGAGCCTTATGGGTCTCATGATATCAAATTGCAACTTGAGATTGACATAAAAGGAGTTGGTCACTCTAAATTGGAGGAATGTAGTGGAGAGTCAAATGCTCTTGATAAGCATTTTCTGATTGGTAAAAAACCTGCTAGCAACCGATTTGATGTTGAAGTTGAGGATAGCAATAAAATGTCTGATGTAAAAGTGGATGAGGCTGTTGGAGAAAATCAACAGATAGAGGGAAATTTAATCAGTAGGATTGGATCAAGCCATGGAAGTTTGGATTTTGATACTGTGAGGGACATGTTTACTAGTGGCATGAACTCGCTCATTAGTGCAGACATAATTGAGGTATACCGGGGCTCTAGTGCTTCAATGGAAGCTCGACTAGAGCTTTTTCAGAAGCAGATTGAAATCACTAGCAAGTATCGTGCTGATGCAAATGTTAAATATGCTTGGCTTGCTGCTTCTAAAGAAGCACTATCTAGTATCATGATGTATGGGCTTGGGCATTGTAGACCGTCCAAAGTGAAGCCTGTATATGGCATTGGTGTTCATCTAACAGCTGCAAACTTCTCATATCCCAGTGTAAATTATTGTGATGTTGACGAAAATGGAGTACAGCACATCGTATTATGTCGTGTTATAATGGGAAATATGGAGCTTGTTCATCCTGGATCTGGACAATGTCATCCCAGTAGTGAGAATTTTGACAGTGGAGTAGATGATCTTCAAAATCCGAAACATTATATAATATGGAATATGAACATGAACACACACATCTATCCTGAATATGTTGTTAGTTTCAAGGTTTCTTCCAGGGTTGGTGCTGAAGGATATCTTATTGGAAATGAGAGCAATTATGACATTTCAGGGGTTACTACTTGTCAAGGGCAGTCTCAAGGCCATTCAAAGTTGGGTTTGCACCCAGTTGGTTTGGGAAATGATTCTCATCCAACTCCAAGTTTAGGAAGATCGCTTGGAAAAGCTACCACTTTGGGTTCAAGCACTCTGAGGGTTCCTAAATCCCCTTGGATGCCATTCCCTATGTTGTTTGCAGCTATCTCAAAGAAGGTTCCTCTAAAAGATATGCAGCTAGTTGATACCCAATATGAACTATTTAGGCGGAAGAAGATAAGTCGGGCTGATTTTGTTAAAAAGTTGAGGTTGATAGTTGGAGACACTTTGTTGAAGTCCACAATAACCCATCTTCAGTGCAAGGTTCCATCAAAAACATCATGTGATCTTGAAGCGCCAAAGCAGGAGCTGGAAAGTTCTGGGAGCCTCTAA 1800 0.3978 METKLEKVLDSKSRIVVGWKRKRAAQYAAHLSALNSKKNRLCKRRKLDGYRMNYGPNFEKSLLKGYSNFMKTELPQRIMFYVNGDWKDFPQNIITLVRKDFQVRKSYTEVELNGNCFMLDFMHMVRVDMKTGLQQPIAWIDEAGNCFIPETFSGEDEIHYCCRHEYGKDQQLFFGEPYGSHDIKLQLEIDIKGVGHSKLEECSGESNALDKHFLIGKKPASNRFDVEVEDSNKMSDVKVDEAVGENQQIEGNLISRIGSSHGSLDFDTVRDMFTSGMNSLISADIIEVYRGSSASMEARLELFQKQIEITSKYRADANVKYAWLAASKEALSSIMMYGLGHCRPSKVKPVYGIGVHLTAANFSYPSVNYCDVDENGVQHIVLCRVIMGNMELVHPGSGQCHPSSENFDSGVDDLQNPKHYIIWNMNMNTHIYPEYVVSFKVSSRVGAEGYLIGNESNYDISGVTTCQGQSQGHSKLGLHPVGLGNDSHPTPSLGRSLGKATTLGSSTLRVPKSPWMPFPMLFAAISKKVPLKDMQLVDTQYELFRRKKISRADFVKKLRLIVGDTLLKSTITHLQCKVPSKTSCDLEAPKQELESSGSL* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0817 599 ProSiteProfiles RST domain profile. 509 580 IPR022003 -
Vvi2g0817 599 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 53 577 IPR044964 -
Vvi2g0817 599 ProSiteProfiles PARP catalytic domain profile. 240 460 IPR012317 GO:0003950
Vvi2g0817 599 Gene3D - 247 444 - -
Vvi2g0817 599 Pfam RCD1-SRO-TAF4 (RST) plant domain 511 575 IPR022003 -
Vvi2g0817 599 SUPERFAMILY ADP-ribosylation 262 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0817 Vvi-Chr2 8468744 8483070 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0817 - - vvi:100260925 1219.91