Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0816 ATGGAAGCGAAGTTTGAAAAGGTATTGGATACTAATAGAAGACTTGTGGTCGGCTTGAAGAGGAAGCGGGTGGCTCAGTATGCAGCAAGCTGGTCCCCCATGCATAAAAATAAGCTCCGCAAGCAGAGAAAATCAGATGGGTGCAGAATGAATTCTGGGTCAAATTTTGGAAAAACTTTACTTAAATATTATTCAAATTTTATGAAAACTGAATTGCCACAACGCATAATGTTTTATTTGAATGGTGAATGGACTGATTTCCCTGAAGATCTTGTTGGCTTGGTGAAGAAAGATTTTCAGGTAAAGAAGTCATATATTGAGGTTGAGCTCAACAACAATCACTTTATGATAGACTTTTTGCACATGAAGCGAGTTGATCTGAAGACAGGTATGGAGAAACCAATTGCTTGGATTGATGAAGCTGGTAACTGCTTCTTTCCAGAAATTTTCTCTGGTGATGCTGAATCCCATAACTGCTGTGGACATGAATGTGGCCAACAGCTTTTATTTAGGGAGCCTTATGGTTCCCATGATATCAAACTGCAACTTGAGATTGATGTAAATGACGCGGGTCACACCAACTTAAAGGAATGTAGTGGAGAGTCAAATCCTGTTATTAAGCATGTTCTCATTGATAAAAATCCTGCTAGTGATCAGAATGACGTAGAAGTTGAGGATAGTTGCAACAAAACATCTGATGCCAAAATGGATAAGGCTGTGGGAGAAAATCAACAGATGGAGGGAAAATTAGTCACCAGGATTGAATCTGTGCATGGAACTTTGAAGTTTGATACTGTGCGGGATATGTTTATTAGCAGCATGAGCCCATTTATTAGTGCAAGTATACTTGAGGTATACCAGGGCTCAAGTTCTTCAATGCAAGCTCGACTAGAGCTCTTTCAGAAGCAGGTTGAGATCACCAGTAAGTATCGCACTGAGGCAAATGTTAGATATGCTTGGCTTGCTTCCTCTAAAGAAGCACTGTCTAGTATCATGATGTATGGGCTTGGGCACTATGGAACATCCCAAGAGAAGCTCACATATGGTATTGGTGTTCATCTCACAGCTGTGAACTTCCCGTACATCAGTGCAAATTATTGTGATGTTGACGAAAATGGTGTACAACACGTCGTATTATGTCGTGTTATACTGGGAAATATGGAGCTTGTTCATCTTGGATCCAAACAATGTTACCCCAGTTGTGAGGATTTTGACAGTGGAGTTGATGATCTTCAAAATCCGAGACATTATATAGTCTGGAATATGAATATGAACACACACATCTATCCAGAATTTGTTGTTAGTTTCAAGGTTTCTTCTAGTTCCAGTGCCGAAGGATATCTAGTTGAAAATGGGAGAAAGGATGATGTTTCAGGGTTTTCTCCTCCTCAAAGGCAGCCCGAAGGCCAGTTGCAGTTAGCCTCACATCATCCGGTTGGTTTGGGACCCCACTGCCCTCAAACTCCAGGTTTAGAGGGATCTCTTGGAAAAGCTGCTACTTTTGGTTCAAGCACTGTAAAGGTTCCCAAATCCCCTTGGATGCCTTTCCCTATGTTGTTTGCAGCTATCTCAAAGAAGGTTCCTCTGAAAGATATGCAACTAGTTAATGCTCAATATGAACAATTTAGGACGAAAAAGATAAATCGGGCTGATTTTGTTAAAAAGTTGAGAATGATAGTTGGAGACACTTTGTTGAGGTCCACAATAACACATCTTCAGTGCAAGTGCCATATTGAAGCCTTCATGCTATGGGTACTATGGGCACAATTCCTTCATATGAGTTCCATCAAAATCTCAGGGCGATGCAAAAGTGCCAAAGCAGGAGCCTGA 1830 0.4093 MEAKFEKVLDTNRRLVVGLKRKRVAQYAASWSPMHKNKLRKQRKSDGCRMNSGSNFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDLVGLVKKDFQVKKSYIEVELNNNHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNCCGHECGQQLLFREPYGSHDIKLQLEIDVNDAGHTNLKECSGESNPVIKHVLIDKNPASDQNDVEVEDSCNKTSDAKMDKAVGENQQMEGKLVTRIESVHGTLKFDTVRDMFISSMSPFISASILEVYQGSSSSMQARLELFQKQVEITSKYRTEANVRYAWLASSKEALSSIMMYGLGHYGTSQEKLTYGIGVHLTAVNFPYISANYCDVDENGVQHVVLCRVILGNMELVHLGSKQCYPSCEDFDSGVDDLQNPRHYIVWNMNMNTHIYPEFVVSFKVSSSSSAEGYLVENGRKDDVSGFSPPQRQPEGQLQLASHHPVGLGPHCPQTPGLEGSLGKAATFGSSTVKVPKSPWMPFPMLFAAISKKVPLKDMQLVNAQYEQFRTKKINRADFVKKLRMIVGDTLLRSTITHLQCKCHIEAFMLWVLWAQFLHMSSIKISGRCKSAKAGA* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0816 609 ProSiteProfiles RST domain profile. 507 578 IPR022003 -
Vvi2g0816 609 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 45 575 IPR044964 -
Vvi2g0816 609 SUPERFAMILY ADP-ribosylation 260 439 - -
Vvi2g0816 609 Pfam RCD1-SRO-TAF4 (RST) plant domain 509 573 IPR022003 -
Vvi2g0816 609 ProSiteProfiles PARP catalytic domain profile. 237 457 IPR012317 GO:0003950
Vvi2g0816 609 Gene3D - 242 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0816 Vvi-Chr2 8417622 8434527 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0816 - - vvi:100245552 1167.53