Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0808 ATGAGATTTTCACCTCTCACTGATTATCAGGCCATAACCACCCATCCGACAACTCGTTTCGCTCATTTGAGTTCAGAAGTCCAAACGGATCCTACCATCCCTACCTGCCATGTTGCCTCAATCTCTTACCCAGGAAGAAGCCACATCAAACCCATGTTCGGTTTCTATCATTTGTTAACTTCAAGGAGAGATGATGTCCTCATCATCTTTGTTTTAACTCAAGAGTGGCGGGGCTTCATCGGCACCGACCCTAAGCCCTCCAACTTCCGTTTATCCTCCATACCCAATGTCATACCTTCAGAGTTGGTTTGCACCGCTAATTTCCTAGGGTTTTTGGAAGCTGTGATGACGAAAATGGAGGACCCATGTGAACGGCTCCTGGATCTGCTCAAATCTCTGGTGACTGTCATTGTGACCGATGCTCTTTTGTTCTGGATTATGGGAGTAGAATGCTTGACACACTGGGTTTATGGCAGGCACTCTGCTTGA 489 0.4683 MRFSPLTDYQAITTHPTTRFAHLSSEVQTDPTIPTCHVASISYPGRSHIKPMFGFYHLLTSRRDDVLIIFVLTQEWRGFIGTDPKPSNFRLSSIPNVIPSELVCTANFLGFLEAVMTKMEDPCERLLDLLKSLVTVIVTDALLFWIMGVECLTHWVYGRHSA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0808 162 Gene3D Glycogen Phosphorylase B; 35 150 - -
Vvi2g0808 162 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 35 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0808 Vvi-Chr2 8272022 8272510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0808 37 149 Glycosyltransferase AT2G30150 44.248 4.76e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0808 - - vri:117915760 145.591