Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0804 ATGGCTGCTTCCCTCTTCTTCTTCTCCCAAAATCCATTCACATCTCCTCAAATTTCCCATCCAAAGATTAGTCTCTCTTCTCCCAAACCCACTCTCACACTCTTCACACCTCCGCCTTTCATTTCAAACAATGCCACTCGTCGTCTCTCCTGCAAGGCTCTCTCCACCATCTCTGTCAACCCCAGCAACTACGAGTTCTCTGATGCTTCTTCTGAGATGGAGTTGAGATTACAATTAGGGGGCGGTGGTACATTAAGTTCTAGAGACATTTTTGTGGATGCTGAAGACAGCTCCTTAAAAATTGGTGTAAAACAGTCTGGGTCTTTCATCACACTTGTTGAAATTAATAAATTGTATGAGAAGATAAAGTCTTCTGAAACAATATGGTATATAGATGAAGATCAACTGGTTGTTAACTTGAAGAAGCAAGACCCAGATTTGAAATGGCCTGACATTGTGGAGTCCTGGGAATCTTTGACAGCAGGAGCTATGCAATTGCTGAAAGGAACATCAATTTACATTGTTGGGGATTCAACTGAAATTAATGATAAAGTTGCTAGGGAACTTGCTGTTGGTTTGGGGTATACCCCACTTAATACCAAGGAGTTGTTGGAAACATTTGCCAAACAATCCATTGATTCATGGGTGACAGCTGATGGGTCTGAGTCTGTAGCAGAAGCAGAAAGTGCTGTATTAGAAAACCTAAGTAGTCATGTCCGTGCTGTTATTGCGACATTAGGAGGACTGCATGGAGCTGCTCGAAGAGCTGATAAATGGAGGCATCTTTATGCTGGATTTACTGTCTGGCTGTCACAGTCTGAATCCATAGATGAAGAGTCAGCAAAGGAGGAGGCCAGAAGGCACATCCAAGAAGGCAGTCTAGGCTACTCAAATGCAGATGTTGTGGTCAAGCTTCATGGTTGGGATGCCGATCATGCTAAAACTGTGGCTCAAGCTTCCCTCAGTGCCCTTAAACAGCTAATCATGTCAGACAAGAAGCTTCCAGGTAAGAAGAGCCTCTACATCAGGCTAGGATGTCGGGGTGATTGGCCAGATATCAAGCCTCCTGGATGGGACCCATCAACTGGAGCTGAGGTACCTGCTGGTACTTTGTAG 1116 0.4444 MAASLFFFSQNPFTSPQISHPKISLSSPKPTLTLFTPPPFISNNATRRLSCKALSTISVNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSFITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADGSESVAEAESAVLENLSSHVRAVIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEESAKEEARRHIQEGSLGYSNADVVVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSLYIRLGCRGDWPDIKPPGWDPSTGAEVPAGTL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0804 371 ProSiteProfiles CS domain profile. 59 153 IPR007052 -
Vvi2g0804 371 Gene3D - 161 337 IPR027417 -
Vvi2g0804 371 Pfam Shikimate kinase 185 273 IPR031322 -
Vvi2g0804 371 SUPERFAMILY HSP20-like chaperones 58 157 IPR008978 -
Vvi2g0804 371 PANTHER SHIKIMATE KINASE 63 339 - -
Vvi2g0804 371 FunFam Probable inactive shikimate kinase like 2, chloroplastic 59 162 - -
Vvi2g0804 371 Gene3D - 53 160 IPR008978 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0804 - - vvi:100266016 702.975