Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0803 ATGGGGCGTCTAAAGCTGCAATCTGGAATCAAGTCAATTGAGGAAGAACCTGAAGATTGTGAATCTACATCTTCTAATAAGGCTGCATTAGCATGTATGATCAATTCAGAAGTAGGTGCTGTATTGGCAGTCATGAGGAGGAATGTCAGATGGGGAGGTCGTTATATGTCAGGCGATGATCATCTTGAGCATTCTCTTATTCAGTCTTTAAAGGCATTGCGGAAGCAAATATTTTCATGGCAGCATCAGTGGCATACCATCAACCCAGCCGTGTATCTCCAGCCATTTCTGGATGTAATTCGATCTGACGAGACTGGGGCACCAATTACAGGTGTTGCCTTGTCATCTGTTTACAAGATTGTAACTCTTGATGTCCTTTGTTTGAATACTGTCAATGTGGAAGATGCTATGCACTTGGTAGTTGATGCTGTAACTAGCTGCCGATTTGAGGTAACTGATCCAGCGTCAGAAGAATTAGTACTCATGAAAATACTTCAAGTTCTTCTGGCTTGCATGAAAAGTAAAGTGTCAGTTATGTTGAGTAATCAGCATGTTTGCACCATTGTGAACACTTGTTACCGCATAGTTCATCAAGCAGCAACAAAAAGTGAGTTGTTGCAGCGGATAGCTCGCCATACGATGCACGAACTTGTCAGGTGTATTTTTTCACACCTTCCTGATGTTGGCAACACCGAACATGCATTGGTTAACAGAGGCAGTTCTGTGAAGCTTGAGGGCAGTGGGCAAGATAATGAGTATAACTTTGGAAATAAACAGTTAGAGAATGGCAATGGTGCTTCTGAATATGATGGTCAACCATCCTCGGTAAGCTTTGCTTCCAATTCTTCCACAGGTCTGGTAGGTAGTATGTTGGATGAAAATACAGTTGGTGCTGGTAATGGGAAGGAGGCTACTCCATATGATTTGCATCTAATGACAGAACCATATGGGGTCCCCTGCATGGTGGAGATATTTCACTTCTTGTGCTCTCTGTTAAATGTTGTTGAGCACATGGGAATGGGTTCTAGATCAAATACTATGGCATTTGATGAAGATTTGCCTCTTTTTGCCCTGGGCTTGATCAATTCTGCTATTGAATTGGGTGGGCTTTCTATTCGTAGACACCCCAGGTTACTAAGTCTGATACAGGATGAACTATTTCGTAATCTGATGCAGTTTGGCTTGTCAACGAGTCCACTAATTCTTTCTATGGTTTGTAGCATTGTTCTCAATCTATATCAGCATTTGCGGACTGAACTCAAACTACAACTTGAGGCTTTCTTTTCGTGTGTAATCCTGAGACTTGCTCAAAGCAAATATGGTGCTTCATACCAGCAGCAAGAAGTTGCTATGGAGGCTCTAGTCGACTTTTGCAGGCAGAAAACTTTCATGGTGGAGATGTATGCCAACTTAGATTGTGACATAACTTGCAGCAATGTGTTTGAAGACCTTGCTAATTTGTTGTCAAAGAGTGCATTTCCTGTGAACTGCCCTTTGTCTGCTATGCATATTCTTGCTTTGGATGGCCTGATAGCTGTAATTCAGGGAATGGCCGAGAGGATAGGCAATGGATCACTTGGTTCAGAACAGTCCCCAGTAAATCTTGAGGAATATACTCCCTTCTGGATGGTGAAGTGTGATAATTATAGTGATCCTAGTGTTTGGGTTCCCTTTGTCTGCCGGAGGAAGTATATTAAAAGAAGACTGATGATTGGAGCTGATCATTTTAACCGGGACCCAAAGAAAGGGCTAGAGTTTCTCCAAGTAACCCATCTCTTGCCTGACAAACTTGACCCACAAAGTGTTGCTTGCTTTTTCAGGTACACTGCTGGGTTGGATAAGAATCTGGTTGGGGATTTCCTGGGAAACCATGATGAGTTTTGTGTTCAGGTTCTTCATGAATTTGCTGGGACTTTTGATTTCCAAGACATGAATCTGGATACTGCATTGCGGCTGTTCTTGGAAACTTTCCGACTGCCTGGAGAATCACAGAAGATACAGAGGGTCCTTGAGGCTTTCTCGGAGAGATATTATGAGCAATCACCCCAGATTCTAGCTAACAAGGATGCTGCTCTGTTGTTATCCTATTCACTTATAATGCTGAACACAGACCAGCACAATGTACAAGTGAAGAAAAAGATGACAGAAGAGGATTTCATTCGGAATAATCGGCACATTAATGGAGGAAATGATCTCCCTAGAGATTTCCTGTCTGAGCTGTACCATTCAATCTGCAAGAATGAGATCCGCACAACTCCAGAGCAGGGTGCTGGTTTCCCTGAAATGACCCCAAGCCGTTGGATTGATCTAATGCATAAGTCCAAGAAAACTGCTCCATTCATTGTGGCAGATTCCAGAGCTTTCCTTGACCATGATATGTTTGCTATAATGTCTGGTCCAACTATTGCAGCTATCTCTGTTGTATTTGATCATGCAGAACACGAAGAAGTTTACCAAACATGTATTGACGGCTTTTTAGCTGTCGCAAAAATCTCAGCCTGCCACCATCTTGAAGATGTTCTAGATGATTTAGTTGTCTCTCTCTGTAAGTTCACAACTCTCTTGAATCCATCACCTGGTGAGGAATCTGTACAAGCCTTTGGGGATGACACAAAAGCAAGGATGGCAACTGTAACAGTTTTCACCATTGCAAATAGGTACGGTGACTATATTCGAACAGGTTGGAGAAATATCCTGGACTGCATCCTAAGGTTGCACAAGCTTGGTCTTCTTCCTGCTCGTGTTGCCAGTGATGCAGCAGATGATTCAGAGCTTTCTGCTGACCCTGGGCAGGGGAAGCCTATTACAAATTCTCTATCTTCGGCTCATATGCCATCCATTGGTACTCCTAGAAGATCCTCTGGACTGATGGGCCGGTTTAGTCAACTTTTATCCCTTGACACAGAGGAGCCAAGATCGCAACCAACTGAACAACAACTTGCTGCTCATCAACGCACCCTCCAGACAATACAGAAGTGCCACATTGATAGCATTTTTACAGAAAGTAAGTTTCTGCAATCTGATTCATTATTGCAGCTTGCACGGGCACTCATCTGGGCTGCAGGGCGACCCCAAAAAGGGAACAGTTCTCCTGAGGATGAAGACACTGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATTACTCTAAACAATCGAGACAGAATTAAGCTTCTGTGGCAAGGTGTTTATGAACACATATCTAATATAGTCCAGTCTACAGTGATGCCTTGTGCCCTAGTGGAGAAGGCTGTTTTTGGACTTCTTCGTATTTGCCAGCGGCTGCTTCCTTATAAAGAAAACCTGGCTGATGAACTTTTGAGGTCACTACAGCTGGTACTGAAGCTGGATGCGCGGGTTGCTGATGCATATTGTGAGCAAATAACTCAGGAAGTCAGTCGCCTTGTGAAAGCAAATGCCACTCACATTAGATCGCAAATGGGTTGGCGCACAATTACATCCTTACTTTCCATCACAGCTCGGCACCCAGAGGCTTCCGAAGCAGGATTTGATGCCTTATTGTTCATCATGTCTGATGGAGCCCACTTGTTGCCTGCCAACTATGTTCTCTGTGTAGATGCCGCAAGGCAGTTTTCTGAGTCTCGTGTTGGTCAGGCAGAGCGGTCCGTGCGTGCTCTGGATCTTATGGCTGGTTCAGTTGTTTGTTTATCACATTGGGCCCTGGAAGCTAAGCAAGCAATGGCGGAGGAGGAGCTTTCAAAAATGTCTCAGGATATTGGGGAGATGTGGCTGAGGCTGGTGCAGGGGTTGAGAAAAGTTTGTTTGGACCAGAGAGAAGAAGTAAGGAACCATGCCCTCATATCATTGCAAAGGTGCTTGTCAGGGGTGGAAGGTTTCCAACTTCCCCACAGTTTGTGGTTGCAATGTTTTGACATGGTCATCTTCACAATGCTTGATGACTTGCTTGATATTGCACAGGGTCACTCCCAGAAAGACTATAGAAACATGGAAGGCACACTTAGCCTTGCTATGAAGCTCCTGTCAAAAGTATTTTTACAGTTGCTGAATGATCTTGCACAGTTAACAACCTTCTGCAAACTATGGCTGGGTGTTCTTAGCCGGATGGAAAAATATATGAAGGTGAAGGTCAAAGGAAAGAGAAGCGAGAAGCTCCCAGAACTAGTTCCAGAGCTCCTCAAAAACACATTGCTTGTAATGAAGACAAGGGGAGTGCTTGTGCAGAGAAGTGCTCTGGGTGGAGATAGTTTGTGGGAGCTGACATGGTTACATGTGAATAACATTGCTCCAACTTTGCAATCAGAAGTGTTTCCTGATCAAGGTTTGGATCAGCCACGTGATAAGAAGGATGAAACAGGGAGAAGTCTGGTGTCTGATGAAATGGGTTCTGTTCCTTCAAATGAAACTGTGGTTTCAGAAGGTGGTCGTACGGGATGA 4413 0.4405 MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRWGGRYMSGDDHLEHSLIQSLKALRKQIFSWQHQWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKIVTLDVLCLNTVNVEDAMHLVVDAVTSCRFEVTDPASEELVLMKILQVLLACMKSKVSVMLSNQHVCTIVNTCYRIVHQAATKSELLQRIARHTMHELVRCIFSHLPDVGNTEHALVNRGSSVKLEGSGQDNEYNFGNKQLENGNGASEYDGQPSSVSFASNSSTGLVGSMLDENTVGAGNGKEATPYDLHLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMGSRSNTMAFDEDLPLFALGLINSAIELGGLSIRRHPRLLSLIQDELFRNLMQFGLSTSPLILSMVCSIVLNLYQHLRTELKLQLEAFFSCVILRLAQSKYGASYQQQEVAMEALVDFCRQKTFMVEMYANLDCDITCSNVFEDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIGNGSLGSEQSPVNLEEYTPFWMVKCDNYSDPSVWVPFVCRRKYIKRRLMIGADHFNRDPKKGLEFLQVTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPRDFLSELYHSICKNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPFIVADSRAFLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCIDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSPGEESVQAFGDDTKARMATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADDSELSADPGQGKPITNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQSDSLLQLARALIWAAGRPQKGNSSPEDEDTAVFCLELLIAITLNNRDRIKLLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANATHIRSQMGWRTITSLLSITARHPEASEAGFDALLFIMSDGAHLLPANYVLCVDAARQFSESRVGQAERSVRALDLMAGSVVCLSHWALEAKQAMAEEELSKMSQDIGEMWLRLVQGLRKVCLDQREEVRNHALISLQRCLSGVEGFQLPHSLWLQCFDMVIFTMLDDLLDIAQGHSQKDYRNMEGTLSLAMKLLSKVFLQLLNDLAQLTTFCKLWLGVLSRMEKYMKVKVKGKRSEKLPELVPELLKNTLLVMKTRGVLVQRSALGGDSLWELTWLHVNNIAPTLQSEVFPDQGLDQPRDKKDETGRSLVSDEMGSVPSNETVVSEGGRTG* 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0803 1470 CDD Sec7 566 749 IPR000904 GO:0005085|GO:0032012
Vvi2g0803 1470 FunFam ARF guanine-nucleotide exchange factor GNOM 559 641 - -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0803 1470 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 69 1434 - -
Vvi2g0803 1470 SMART sec7_5 562 749 IPR000904 GO:0005085|GO:0032012
Vvi2g0803 1470 FunFam ARF guanine-nucleotide exchange factor GNOM-like 641 759 - -
Vvi2g0803 1470 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 319 480 IPR032691 -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 1428 1470 - -
Vvi2g0803 1470 Gene3D - 559 641 - -
Vvi2g0803 1470 Pfam Sec7 domain 566 749 IPR000904 GO:0005085|GO:0032012
Vvi2g0803 1470 SUPERFAMILY ARM repeat 355 1345 IPR016024 -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 1451 1470 - -
Vvi2g0803 1470 SUPERFAMILY Sec7 domain 563 750 IPR035999 GO:0005085|GO:0032012
Vvi2g0803 1470 Gene3D - 642 759 IPR023394 -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 1433 1448 - -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 253 275 - -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 922 955 - -
Vvi2g0803 1470 MobiDBLite consensus disorder prediction 930 948 - -
Vvi2g0803 1470 ProSiteProfiles SEC7 domain profile. 558 747 IPR000904 GO:0005085|GO:0032012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0803 Vvi-Chr2 8205082 8210369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0803 K18443 - vvi:100247152 2895.92