Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0802 ATGCCGCGCACTAGCACACTGGAGTGCCCTGGTTGTCCTCCAATCAGAGCTTTAACATTTGATGTCCTCGGTCTTGTTAAAGTTACTGAAGCTCGTAGTAAGGAAGGAGGAATTCCCAAGGTGGTGGATAGATGGGGTGAGCCCGACTCATCCAAATGCATACTTGCTGCTTCTATTGATGACCGCAAATCTGGCCCTTTGTTAGCTATTGCTAGGGAAGGTGGTCTGATTGAGATTCTTAACCCTCTTAATGGGCATCCTTGTCTTTCAATCTCCAATATCATTGATAATGGTCCTGAGCCTGGAGATGATGCTATTGTTGGGTTGCATTTGTTCAAAAAGCAAAATTTGGACTTATCGTCAAGGTCACACACCTTGCTTACATGTACAACAAAAGGAAATGCAAGTATGAGGTCTGTTGAACTTACCAGTTCACATGCGGATTCCACCTCAAGTGTTTCTTCAAGAACATGGAATGTATGTGCTTCTGGTAATATCTTATGTTCTCAAGTGGATGGAAATGAAAACTATGCTTTGTTTGGCGGGAAGGGTGTTGAAGTTAATGTTTGGGATCTTGAACAGGGTACTAAGATTTGGACTGCAAAATCTCCTCCTAAAAACAGCCTTGGCTTATTCACTCCAACTTGGTTTACATCTGCAACTTTCCTAAGTAAAGATGACCACCGTAAATTTGTTGCTGGCACAAACAGTCATCAGGTTCGCCTTTATGATATTTCTGCTCAGAGAAGGCCTGTTATATCATTTGACTTCCGGGAGACCCCTATTAAAGCAGTTGCTGAAGATCAAGATGGCTATACCATCTACATAGGAAATGGATCAGGCGACCTTGCTTCTGTTGACATGCGCACAGGGAAATTGTTAGGATGCTTTTTGGGAAAGTGTTCTGGAAGCATTAGATCCATAGCCAGGCATCCAGAGCTCCCTGTGATAGCATCATGTGGATTGGATAGCTACTTGCGCTTTTGGGATATAAAAACAAGGAAGGTTCTTTCTGCGGTTTTCCTGAAGCAGCCTCTTACAAATGTTGTTTTTGATTCTAATTTTGCTGAGGAAGAAGTTCCATCTTCTGTAGTGGATCCACCAACTGAAGCACAAAATACGAATGAGACCCAGGAGAGTGATGAGGAAGAAGTGCAGCCTCTGAAAAGAAAGAAAAAATCGTCAAAGCATAGTGGAAGCAAGAAGCCGAAACCCAAGAAAAGAAGCAAAAAGGCTCAAGACGAGACGGTTGATGATTCATCATGA 1266 0.4281 MPRTSTLECPGCPPIRALTFDVLGLVKVTEARSKEGGIPKVVDRWGEPDSSKCILAASIDDRKSGPLLAIAREGGLIEILNPLNGHPCLSISNIIDNGPEPGDDAIVGLHLFKKQNLDLSSRSHTLLTCTTKGNASMRSVELTSSHADSTSSVSSRTWNVCASGNILCSQVDGNENYALFGGKGVEVNVWDLEQGTKIWTAKSPPKNSLGLFTPTWFTSATFLSKDDHRKFVAGTNSHQVRLYDISAQRRPVISFDFRETPIKAVAEDQDGYTIYIGNGSGDLASVDMRTGKLLGCFLGKCSGSIRSIARHPELPVIASCGLDSYLRFWDIKTRKVLSAVFLKQPLTNVVFDSNFAEEEVPSSVVDPPTEAQNTNETQESDEEEVQPLKRKKKSSKHSGSKKPKPKKRSKKAQDETVDDSS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0802 421 CDD WDR74 23 361 - -
Vvi2g0802 421 FunFam WD repeat-containing protein 74 48 362 - -
Vvi2g0802 421 SUPERFAMILY WD40 repeat-like 52 354 IPR036322 GO:0005515
Vvi2g0802 421 MobiDBLite consensus disorder prediction 360 421 - -
Vvi2g0802 421 ProSiteProfiles Trp-Asp (WD) repeats profile. 298 339 IPR001680 GO:0005515
Vvi2g0802 421 Gene3D - 103 355 IPR015943 GO:0005515
Vvi2g0802 421 PANTHER NOP SEVEN ASSOCIATED PROTEIN 1 1 413 IPR037379 GO:0005730|GO:0042273
Vvi2g0802 421 ProSitePatterns Trp-Asp (WD) repeats signature. 317 331 IPR019775 -
Vvi2g0802 421 SMART WD40_4 290 330 IPR001680 GO:0005515
Vvi2g0802 421 SMART WD40_4 205 244 IPR001680 GO:0005515
Vvi2g0802 421 MobiDBLite consensus disorder prediction 391 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0802 K14841 - vvi:100260812 808.135