Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0801 ATGAGCTCATCGGGTCCCGATCTGGTGTGCCAACTCGACAACGTCCAAGGTATGGTCGATGCTCTCACCGCCGTCCGATGGAAACGCCATCAGGACGCGGTCATGGAATTATCGGAGCACGGCGTCGTCTTGATCGTGGAGGAGACTCGTTGTCTCCAAGCCAAAGTTTATCTGCAGCGCGAGCTTTTCGTTCAGTACGAGTACAGTGCTCAAGGGCGGCCTCGGTTTGGAGTGAGCTTGAGCCTCTTTGTTAATTGCCTCAACACTTTCTCAGTTCCCGGGCGCTCAAATATGATTGAAATTCGGTATCCGGGACCAGATATGCAGCTTCTTCTCAAGTCTGTTGATTCCATGGATGCTTGCATTTATGCAGAGATCAGAACAAGGATCCCGGATACAATTTCATGGGACTACAACTTTGAACCTGCTGGAAGTACTCCGCTCAGTTTTACTGTCAAGTCTGCAGCACTGAAAGAAGCCATTGATGACCTTGAATGGCCAGGATCTAGCATCCAGATAACCTTGGAACCAGTTCCCCCTTCAGTTACCTTTAGAGGTGAAGGCCATGGAGACTTACAGATAGATTTCATGTATTACGCGAACACCGATCTTTTGATTGCTTTCCATTGTGATCACAGAGTCTCTTACAGATACAAGTATAAGTTTCTTCGTGCAACAACTTCAAACATACCCAGCAGTGTCATCAGAGATAACCGAGGAAGCAAGTTGACCATTGGGAGAGGTGGGATGTTGAAAGTTCAGCATCTAGTTTCAGTAGCAAGACCATCTATTCCACATCCACATGTTGATTCTGCTGGCTATCAGCAACCCAGTCGAATTGCTTACATCGAGTTCTTTGTCAAGCCAGAGGAATATGAAGAAGACATCCAAAACGGTTCCTAG 903 0.4718 MSSSGPDLVCQLDNVQGMVDALTAVRWKRHQDAVMELSEHGVVLIVEETRCLQAKVYLQRELFVQYEYSAQGRPRFGVSLSLFVNCLNTFSVPGRSNMIEIRYPGPDMQLLLKSVDSMDACIYAEIRTRIPDTISWDYNFEPAGSTPLSFTVKSAALKEAIDDLEWPGSSIQITLEPVPPSVTFRGEGHGDLQIDFMYYANTDLLIAFHCDHRVSYRYKYKFLRATTSNIPSSVIRDNRGSKLTIGRGGMLKVQHLVSVARPSIPHPHVDSAGYQQPSRIAYIEFFVKPEEYEEDIQNGS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0801 300 Gene3D - 6 291 - -
Vvi2g0801 300 SUPERFAMILY DNA clamp 149 256 IPR046938 -
Vvi2g0801 300 CDD PCNA 9 257 - -
Vvi2g0801 300 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD1 3 294 IPR003021 GO:0000077
Vvi2g0801 300 PRINTS Repair protein Rad1/Rec1 family signature 10 27 IPR003021 GO:0000077
Vvi2g0801 300 PRINTS Repair protein Rad1/Rec1 family signature 54 70 IPR003021 GO:0000077
Vvi2g0801 300 PRINTS Repair protein Rad1/Rec1 family signature 218 235 IPR003021 GO:0000077
Vvi2g0801 300 PRINTS Repair protein Rad1/Rec1 family signature 277 292 IPR003021 GO:0000077
Vvi2g0801 300 Pfam Repair protein Rad1/Rec1/Rad17 9 233 IPR003021 GO:0000077
Vvi2g0801 300 FunFam Damaged DNA binding protein 5 291 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0801 K02830 - vvi:100255740 609.372