Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0794 ATGCCGCCGGAAGATTACTATGACTACATCGTCGTCGGCGGGGGAACTGCCGGGTGCCCATTGGCGGCGACGCTGTCGGAGAATTTTCGAGTATTGGTTCTGGAACGTGGTGGTGTGCCTTACACCAATCCCAATCTGATGAGCCAAGATGGTTTCTTAACCTCTCTCATGGAGGCCGACCCCTACGACTCCCCTGCTCAAACATTCACGTCCGAAGATGGCGTAGCCAACGCCAGAGGCCGGGTTCTCGGCGGCAGTAGCGCAATCAACGCCGGCTTCTACAGCAGAGCTGACGAAGATTTCTATAAAAAATCAGGGCTGAAATGGGACCTCCACATTGTCAATCAGTCGTATGAGTGGGTGGAGAGGGCGGTGGTCTTTAGGCCGGAGCTCAAGAACTGGCAATCAGCAGTTCGGGACGGGTTGTTAGAGGCTGGTGTTGATCCATACAGGGGTTTCATTCTTGATCATGCCGTGGGAACCAAGATTGGTGGCTCCACTTTTGATAGTTCCGGCAGGCGGCACACTGCCGCTGACCTTCTTGGCTATGCCAAAGCCACCAACATCAGAGTGGCAGTCCACGCCAGTGTTGAAAGAATCCTCCTTGCCCCTACTTCAGCCCTGTCTGGGTCGAAGCAGTCTGCAATCGGGGTGGTGTATCGTGATAGAATAGGGCGGTACCACCATGCAATGGTTCGGGAAAATGGAGAGGTGATACTGAGTGCTGGGGCCATTGGGACTCCTCAGCTGCTGCTCTTGAGCGGCATTGGGCCAAGGTCGTATCTCTCTTCGTGGGGAATTCCGGTGGTGCATCATTTGCCTTATGTGGGGCAGTTCCTCTATGATAACCCCCGAAATGGTATTTCAATTGTTTCCCCAATTCCCCTCGAGCATTCATTGATACAAGTAGTGGGAATAACTAATTTAGGGGCTTATATTGAAGCAGCTTCCAATGTCATACCTTTTGCATCTCCTGCCCGCTCTGTTTTCATTCGGACACCTTCTTCTCCCCTCTATCTCACTGTGGCCACCCTCATGGAGAAGATAATTGGGCCACTCTCGAGTGGTTCTCTTCAACTCGCATCCACAGATATCAAGGTGAACCCACTTGTCAGGTTTAACTATTTTGCTGATCCACTTGACTTGGAACGATGTGTAAGTGGCATGCGCAAGGTTGGGGATGTCTTGAGGAGTCGTTCAATGGAGGAGTTCAAGTTCAGGGAGTGGTTTGGGGGTCAAGATTTCAGGTTTGTTGGACCTGCATTGCCTGTTAACCAATCCAATGATGCTCAGATGGCTGAGTTCTGCCATCGAACAGTGAGCACGATATGGCATTATCATGGAGGCTGCATTGTGGGTAAGGTGGTTGATAGTGATCACCAGGTCCTTGGCATTGATGCTCTTAGAGTTGTCGATGGTTCAACTTTCAATGTGTCACCAGGCACTAATCCTCAGGCTACTTTAATGATGCTCGGACGGTATATTGGGATAAAAATAACCAAAGAGCGAATGAGATAG 1518 0.5072 MPPEDYYDYIVVGGGTAGCPLAATLSENFRVLVLERGGVPYTNPNLMSQDGFLTSLMEADPYDSPAQTFTSEDGVANARGRVLGGSSAINAGFYSRADEDFYKKSGLKWDLHIVNQSYEWVERAVVFRPELKNWQSAVRDGLLEAGVDPYRGFILDHAVGTKIGGSTFDSSGRRHTAADLLGYAKATNIRVAVHASVERILLAPTSALSGSKQSAIGVVYRDRIGRYHHAMVRENGEVILSAGAIGTPQLLLLSGIGPRSYLSSWGIPVVHHLPYVGQFLYDNPRNGISIVSPIPLEHSLIQVVGITNLGAYIEAASNVIPFASPARSVFIRTPSSPLYLTVATLMEKIIGPLSSGSLQLASTDIKVNPLVRFNYFADPLDLERCVSGMRKVGDVLRSRSMEEFKFREWFGGQDFRFVGPALPVNQSNDAQMAEFCHRTVSTIWHYHGGCIVGKVVDSDHQVLGIDALRVVDGSTFNVSPGTNPQATLMMLGRYIGIKITKERMR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0794 505 PIRSF Alcohol_oxidase 1 315 IPR012132 GO:0050660
Vvi2g0794 505 PIRSF Alcohol_oxidase 334 504 IPR012132 GO:0050660
Vvi2g0794 505 SUPERFAMILY FAD-linked reductases, C-terminal domain 280 449 - -
Vvi2g0794 505 Gene3D - 127 442 - -
Vvi2g0794 505 Gene3D - 7 492 IPR036188 -
Vvi2g0794 505 Pfam GMC oxidoreductase 352 493 IPR007867 GO:0016614
Vvi2g0794 505 ProSitePatterns GMC oxidoreductases signature 2. 243 257 IPR000172 GO:0016614|GO:0050660
Vvi2g0794 505 PANTHER OSJNBA0019K04.7 PROTEIN 2 504 - -
Vvi2g0794 505 SUPERFAMILY FAD/NAD(P)-binding domain 5 502 IPR036188 -
Vvi2g0794 505 Pfam GMC oxidoreductase 7 284 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0794 Vvi-Chr2 7997844 7999451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0794 7 503 Miscellaneous Gene Families AT5G51950 48.694 1.52e-159 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0794 K08248 - vvi:100254058 1014.99