Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0772 ATGGCACTCAATAACACTGTCATTGGAGCAATCAACTTTGTAGCTATGCTTCTCTCCATTCCCATCATCGGCACGGGGATTTGGCTATCAACAGAGCCTGATAATTCTTGTGTGAAGATCCTACAATGGCCAGTCATCATTTTGGGCGTCTTGATCTTGGTTGTGGCTCTAGCAGGATTTATAGGAGGGTTTTGGAGAATCCCATGGCTCCTTCTCTTTTACCTTATTGCCATGCTGATCCTTATAATTTTGCTGGCCTCTTTGGTGGTTTTCATTTATATGGTTACCGTTCGAGGCCATGGCCACATCGAACCAAGTCGGGCTTACTTGGAGTATCATCTTGATGACTACTCAGGATGGCTTCGCAGAAGAGTTCGAAGTTCCTACAAGTGGGATCGGATTAGAACCTGTCTTAGCTCCACAAATATGTGTGCAGAGTTGAACCAGCGTTATCGGATGGCCCAGGATTTCTTCAATGCACATATTAGTCCCATACAGTCGGGATGCTGTAAGCCACCAACTGAATGCGGGTACACCTTTGTGAATCCGAGCTATTGGATTAGCCCCATATACACAGCAGCGGACATGGATTGCCTGCAGTGGAGCAACGAGCAGACACAGTTGTGCTACAACTGCAACTCATGCAAAGCTGGGTTACTGGCAAATCTGAAGAAGGAATGGAGAAGAGCAGACATTGTTCTACTCATAACTCTGATTGCTTTGATAGCAGTTTATTTGATCGGGTGTTGTGCATTTAGAAATGCTAAAACAGAAGAGCTGTTTCGCAAGTACAAGCAAGGCTATACGTAA 810 0.4519 MALNNTVIGAINFVAMLLSIPIIGTGIWLSTEPDNSCVKILQWPVIILGVLILVVALAGFIGGFWRIPWLLLFYLIAMLILIILLASLVVFIYMVTVRGHGHIEPSRAYLEYHLDDYSGWLRRRVRSSYKWDRIRTCLSSTNMCAELNQRYRMAQDFFNAHISPIQSGCCKPPTECGYTFVNPSYWISPIYTAADMDCLQWSNEQTQLCYNCNSCKAGLLANLKKEWRRADIVLLITLIALIAVYLIGCCAFRNAKTEELFRKYKQGYT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0772 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Vvi2g0772 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016020
Vvi2g0772 269 PRINTS Transmembrane four family signature 6 29 - -
Vvi2g0772 269 PRINTS Transmembrane four family signature 38 64 - -
Vvi2g0772 269 PRINTS Transmembrane four family signature 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0772 Vvi-Chr2 7572899 7574333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0772 1 269 Miscellaneous Gene Families AT5G46700 75.093 1.17e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0772 - - vvi:100266064 514.227