Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0755 ATGATTGTTTTGGGAATAACATTGCATGGTTATTTTTCTTGTGCCTCTGGTAAACAGGTAAAAGTTTGTGATATATGTGGGGATGCAGGTCTGGAGGAACTGCTTGCTACTTGTACCAAGTGCAGTGATGGGGCAGAGCACATTTACTGCATGCGCATAAAGCTGGAGAAAGTTCCTGGACGGGGTTGGATGTGTGAAGAATGCATGGCCAAGGAAGAAACTCAAAAAGAAATGAAGTGTACAATTGGATTTTTAAAAGGGTCATCCTTGAATCAAACAAGAAAGAATTCTGGGAATTCAAGTACTTCTAAATTTGAGAATTTCTTGGAATTTGAGAGTATGGATTCAACTGTTTCCAGAAGCAGAACAAAAAGCCTTGATTCTGCACCCCAATTCTCTGCTAAGAGACCTGCCGACAGTCTAGAAACTGTCCCAGTTACGAAAAAGAGGACTCTTGAAACCATTACCAGACCAACTAAGGTGCCCAGCCCCCACAAAAAAGATATATTATCATGGGATTCTTCATTCAGGAACTTGTGTAAGGGGAAAGTGAAGCAAGCCCATGAAACATCTTTTGGTGATAATTCTTCTAATAATACTCTGCAAAGTGCATGCTTACCTACTGTGTCAGATTATAAGTCACAAAAAATTCCACAACAGCTACAAATGTCACGGGGTTCTCTTCTTAAATCAAATTCATTCCACATTTTAGACGCAAATCTGAAAGTTAAACTGTCTGAGAAAGCTGTTCTTCAGAAGCAAAAATTTACCAGAGAAACTGATACCAGTGACATGAAAAAGGGGATTGGCAGAATGATGAGTAAATCCTTGTCATTTAATGGTGTTGGCTCAAAACATTTGAATGTTGCTCAATCAAAAGTTAAAATGTTCTCTTCTAATTTTTCTCATGTTGAGGATTTGAAGAGATTACGACATGCAAAACAGAACTCACTTCAAAGGGATCATAAATCCAAATCATATAACCCTCACATGATTTCACCAGTGGCTGGCTCTGGTGATTCTGCACCAACAACTGACAAAAAAACAGCTTCTCGTGGTGAAACTGTATTAGCCCATTCTTCTGGGATCACTTGCAATGAGTTGAGGTCTATGCAGTTTCATAGAAATTCTAATAATTCTTCAGAACCGACCAGTCGGCTTGCTCCTAAAGACTTAAAATGTTCCCATGGCCAAGGAGTTAGTGGAGCAAAGAGGTCAGCTTTGTGTTTATCTGATGTGGATAAAGATCCATCTCCCAGAATGTCTGATTCTTCTCATGAACCCAAGGTGAACCGAGGTATCCCTGAGGTTGTGCTCACATCTAGCTCATCATTGACTATTAATAGGCATAACTGTAATCCTGGTGCTATTCTGCAAGATCAATCATCTCAAACGGGAAAATCCTCTAATCAGGAAGAACAATCCAGGGTTATCTGTTCTTTCAGCCAGCCCAGGCTGAAAATCTCAGTTGGAAGTAGAAGTGCACACTGCCACAGATGCAAAGGAATAGGCCATTCTAGAGAATCTTGCCCAACCATGAGTTCTCAGGTTCCTATTCTTGATGCTGGAAATTCAAAAGAAGTGAACAAAAGTAGTAAGATGGGAGATGTGGCCAAAGCTGCTATTGTTGGAAAAGATGAATTACACAAAAGGTCCAGATGTCCCAATCAATCTGATGAATTATCTATGTCCAGTTCCAATGTGAACAGCAAAGTTTCTTCAAGCGATTACCTGTCAAGGCATTCAAGTTGGTTAGTGAATCTGTTGTCTGCTGATGAAACCAATGAACAACAAATTAGAGTTGCTAAGGATGTGAGATGGCATGTTGAGCACAATACACAAGCAGCAAATATGATCAAAGTGGAGAACTCAAATTCCGTTGTTCCTTCTGATGAAAGGTTGTATGTGAGAGATGTGCCAAGGCTTGCTTCTACGGTGTCCTTTCCTTCTCGGATTTCTGCTGTTCCAGAGCTTGATTACATATGGCAAGGAGGATTTGAAGTGCATAGAATTGGAAGGCTTTCAAGTCATTATACTGGGATTCAAGCACATTTATCGACTTGTGCATCACCAAAAGTTCTTGAAGTGGTGCACATGCTTCCTCCAAAAATCATTTTGGAGGAAGTACCTCGCTTGAGTACTTGGCCAGCTCAGTTCATGGAAAATTATGCCACTGAAGATAACATTGCTCTCTACTTCTTTGCAGCAGATCTTGAGAGCTATGGGAGAAACTACAAGAGCTTGCTGGAATGGATGATTAAGAATGATTTAGCCCTCAAAGGAAATCTCAAGGGAATAGAACTTCTGATATTTTCATCCAAACTGCTTCCTGAAAAATCCCAGCGTTGGAATGCATTATCATTTTTATGGGGTGTATTCAGAGTAAGGAGGGTAAATAACTCAGAACATGTCCCTACTTCTCATATACAGGTTTCTGTTCCCTGCTTGAATATATTACCCTCAGACCAAGATTTGTCTATTACTACCTCTGGGCAGTTGTTTGAAAGTCGATCTGCAACTAACGTAGCCCCACAGGAATTACGACGCATCAATTCTGGAAGGACAAGTTTTGATCAGAAACCAAGTAGAGTCAATACCATTTCATGTTCTAGTGCTCCTATAGGAGAGCAGTTCTCCAATGATATGCTACAGACTAACATCTCCCTGAATGAACATAGAGGTTGTGAGGGAAGAGTGGAGGTGGATCCCAAACTGTGTCTTCAGGCAAGGGGAGAACATAGGAGTGAAGGCATGAAAGTTGAGGAAAAAACTGAATGTGAGAGGGCTCAGAGTGACTTCTGTGGAATGTATGAGTACAATACTGCTAGAGACGCAAAGTATTCGGGTAATGGATATCCATCTGGGGTGAATGATCCTCATTGTAGTTTCCCTGTTGAGGATCAAAGATGTCAGGGAGCTCATAACATTGAGATTTCTGAGAAATTAAAGATGACGGGGGGATCTGCATTTTCTGCATCAGGTTCAGTAGACCTTGGTTTGGGAGTCAAGTTCAGTCAGCAGCAAGTACCCTCAATAGATGGAGAAGACCAGGCAAAATCTGGGTATCCAAATCTTGAGCTTTCTTTAGGGGCTGAAAAGAAACCAACAAAACAAGAAATGGCGCCTTCATTTCTTGGGATTGTGAACAAGAAAAGTAATCAAGATAAGCATCAAAATCCAGAGTCAAACAGGAAAAGTAGTGATGAAGAACTATCCCTTTCTCTTTCTCTTGGTTTATCTTTCCCTGACAGAACTAATGCCAGAGCCTGA 3270 0.408 MIVLGITLHGYFSCASGKQVKVCDICGDAGLEELLATCTKCSDGAEHIYCMRIKLEKVPGRGWMCEECMAKEETQKEMKCTIGFLKGSSLNQTRKNSGNSSTSKFENFLEFESMDSTVSRSRTKSLDSAPQFSAKRPADSLETVPVTKKRTLETITRPTKVPSPHKKDILSWDSSFRNLCKGKVKQAHETSFGDNSSNNTLQSACLPTVSDYKSQKIPQQLQMSRGSLLKSNSFHILDANLKVKLSEKAVLQKQKFTRETDTSDMKKGIGRMMSKSLSFNGVGSKHLNVAQSKVKMFSSNFSHVEDLKRLRHAKQNSLQRDHKSKSYNPHMISPVAGSGDSAPTTDKKTASRGETVLAHSSGITCNELRSMQFHRNSNNSSEPTSRLAPKDLKCSHGQGVSGAKRSALCLSDVDKDPSPRMSDSSHEPKVNRGIPEVVLTSSSSLTINRHNCNPGAILQDQSSQTGKSSNQEEQSRVICSFSQPRLKISVGSRSAHCHRCKGIGHSRESCPTMSSQVPILDAGNSKEVNKSSKMGDVAKAAIVGKDELHKRSRCPNQSDELSMSSSNVNSKVSSSDYLSRHSSWLVNLLSADETNEQQIRVAKDVRWHVEHNTQAANMIKVENSNSVVPSDERLYVRDVPRLASTVSFPSRISAVPELDYIWQGGFEVHRIGRLSSHYTGIQAHLSTCASPKVLEVVHMLPPKIILEEVPRLSTWPAQFMENYATEDNIALYFFAADLESYGRNYKSLLEWMIKNDLALKGNLKGIELLIFSSKLLPEKSQRWNALSFLWGVFRVRRVNNSEHVPTSHIQVSVPCLNILPSDQDLSITTSGQLFESRSATNVAPQELRRINSGRTSFDQKPSRVNTISCSSAPIGEQFSNDMLQTNISLNEHRGCEGRVEVDPKLCLQARGEHRSEGMKVEEKTECERAQSDFCGMYEYNTARDAKYSGNGYPSGVNDPHCSFPVEDQRCQGAHNIEISEKLKMTGGSAFSASGSVDLGLGVKFSQQQVPSIDGEDQAKSGYPNLELSLGAEKKPTKQEMAPSFLGIVNKKSNQDKHQNPESNRKSSDEELSLSLSLGLSFPDRTNARA* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 1069 1089 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 1029 1089 - -
Vvi2g0755 1089 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 89 IPR013083 -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 338 361 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 416 430 - -
Vvi2g0755 1089 SMART PHD_3 22 69 IPR001965 -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 313 327 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 122 142 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 374 430 - -
Vvi2g0755 1089 SUPERFAMILY FYVE/PHD zinc finger 19 73 IPR011011 -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 313 361 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 1054 1068 - -
Vvi2g0755 1089 MobiDBLite consensus disorder prediction 450 471 - -
Vvi2g0755 1089 PANTHER - 20 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0755 Vvi-Chr2 7333968 7339268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0755 - - vvi:100243800 2105.87