Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0748 ATGGCCGCTTTCAACGTCTCTTCCAAAATGACACCGCTCAAATTCCACGCGGTCCCGACCTCCGATCGTCTTTCCTGGTCGAAAAGCGTCTCCGACTTCGCCGCCGGGTTGCATTCGCGGAGGAGATGGGAGCGGATGCAAGTGGCCGCCCTTCGATCCATGAAGATCACGGAGCATGATCAGATGCCTGATCTCACTTCCCAGAACGGTCCTTTAACTTTTGATACGGTGAAGACTCCTTTTGAACTTCAATCTAGTGATTCCACTCTGGGAAATCAGAGGATAATGTCGAATCCTCGACGGAAAACGAAGATAGTATGTACTATTGGTCCCTCCACTAGTTCACGAGAAATGATATGGAAACTGGCAGAAACTGGAATGAATGTTGCACGTTTGAATATGTCACATGGGGACCATGCATCGCACAAGAAAACCATTGATCTGGTCAAAGAATACAATGCTCAATTTGAAGACAAGGTTATAGCCATAATGCTGGACACCAAGGGTCCTGAGGTCAGAAGTGGAGATGTCCCTAAACCAATCATGCTTAAGGAGGGACAAGAATTCAACTTCACTATTAAAAGAGGAGTCAGCTCAGAAAACACTGTCAGTGTAAATTATGATGACTTTGTGAATGACGTGGAGGTTGGAGATATACTTCTTGTTGATGGTGGAATGATGTCATTAGTTGTGAAATCAAAGTCTAAGGATTTGGTTAAGTGCCAAGTAATTGATGGTGGTGAGCTGAAATCAAGGCGTCACTTGAATGTGCGTGGAAAAAGTGCAACTCTGCCTTCAATAACAGACAAAGACTGGGAAGATATCAAGTTTGGAGTGGACAACCAAGTTGATTTCTATGCTGTTTCCTTTGTGAAAGATGCTGAAGTGGTCCATGAGTTGAAAGATTACCTCAGAAGCTGTGGTGCAGATATTCATGTGATTGTGAAAATTGAAAGTGCAGATTCCATACCAAATCTTCATTCCATTATTTCTGCTTCTGATGGGGCAATGGTTGCACGTGGGGATCTTGGAGCTGAACTTCCAATTGAGGAAGTCCCTTTATTGCAGGAGGACATCATTAGAAGGTGTCACAGCATGCAGAAGCCTGTTATTGTAGCAACAAACATGTTGGAGAGCATGATTAATCATCCTACACCAACAAGGGCCGAAGTTTCTGATATTGCAATTGCTGTAAGAGAAGGTGCTGATGCAGTTATGCTTTCTGGAGAAACTGCCCATGGAAAGTATCCGTTGAAAGCTGTTAAAGTAATGCATACTGTGGCATTGAGGACTGAGTCTAGTCTATCAACCAGCACAACTCCTCCAAGTCAAACTATACCCTACAAGAGTCATATGGGTACAATGTTTGCTTTCCATGCCACCACTATGGCTAACACTCTTAATACTCCCATCATTGTCTTTACAAGAACTGGATCCATGGCTATAACTTTAAGCCATTATCGGCCTTCCTCAACAATCTTTGCCTTCACTAATGAAGAAAGAGTTAAGCAGAGGTTGGTGCTTTATCATGGTGTGATGCCTATATTTATGCAGTTTTCAGATGATGCTGAGGAGACCTTCTCTCGAGCCCTCAGCATACTAGTGAACAAGGGCCTAATGAAGGAGGGAGAGCATGTGACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGTTGAATCTACTCACCACATCCAAGTTCGTAAGGTCCAAGGTTGA 1719 0.4386 MAAFNVSSKMTPLKFHAVPTSDRLSWSKSVSDFAAGLHSRRRWERMQVAALRSMKITEHDQMPDLTSQNGPLTFDTVKTPFELQSSDSTLGNQRIMSNPRRKTKIVCTIGPSTSSREMIWKLAETGMNVARLNMSHGDHASHKKTIDLVKEYNAQFEDKVIAIMLDTKGPEVRSGDVPKPIMLKEGQEFNFTIKRGVSSENTVSVNYDDFVNDVEVGDILLVDGGMMSLVVKSKSKDLVKCQVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAEVVHELKDYLRSCGADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEEVPLLQEDIIRRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKYPLKAVKVMHTVALRTESSLSTSTTPPSQTIPYKSHMGTMFAFHATTMANTLNTPIIVFTRTGSMAITLSHYRPSSTIFAFTNEERVKQRLVLYHGVMPIFMQFSDDAEETFSRALSILVNKGLMKEGEHVTLVQSGAQPIWRVESTHHIQVRKVQG* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 390 408 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 159 175 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 409 425 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 283 297 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 313 339 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 365 389 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 PRINTS Pyruvate kinase family signature 340 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 Pfam Pyruvate kinase, alpha/beta domain 460 550 IPR015795 -
Vvi2g0748 572 Gene3D - 432 550 IPR036918 -
Vvi2g0748 572 SUPERFAMILY PK C-terminal domain-like 419 570 IPR036918 -
Vvi2g0748 572 Pfam Pyruvate kinase, barrel domain 101 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 FunFam Pyruvate kinase 432 551 - -
Vvi2g0748 572 ProSitePatterns Pyruvate kinase active site signature. 311 323 IPR018209 GO:0004743|GO:0006096
Vvi2g0748 572 FunFam Pyruvate kinase 266 431 - -
Vvi2g0748 572 PANTHER PYRUVATE KINASE 87 548 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 NCBIfam pyruvate kinase 101 570 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vvi2g0748 572 FunFam Pyruvate kinase 171 264 - -
Vvi2g0748 572 Gene3D - 170 265 IPR015806 GO:0004743|GO:0006096
Vvi2g0748 572 SUPERFAMILY PK beta-barrel domain-like 170 261 IPR011037 -
Vvi2g0748 572 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 99 434 IPR015813 GO:0003824
Vvi2g0748 572 Gene3D - 101 431 IPR040442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0748 Vvi-Chr2 7190996 7216881 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0748 K00873 - vvi:100257566 1112.83