Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0743 ATGGCACTGAGAATGTGGGCTTCTTCTACTGCTAATGCTCTGAGAGTCTCTTGTGCCTCCAAAGCTCATGTGTCTCCTGCATTTTCTCTCTCAAGATGCTTTTCCTCTGTTTTGGATGGATTGAAGTATGCAACTTCACATGAATGGGTGAAGCATGAAGGCTCAGTGGCAACAATTGGTATCACTGATCATGCTCAGGACCACCTAGGAGAAGTAGTGTTTGTGGAGATACCAGAGCCTGGTGGTTCAGTTTCAAAAGGAAACGGCTTTGGAGCTGTGGAAAGTGTGAAAGCAACCAGTGATGTCAATTCCCCAATCTCTGGCGAGGTTGTTGAGGTCAACTCTAAGCTTAGTGAAGCGCCTGGTTTGATCAATTCAAGCCCATATGAAGATGGATGGATGATCAAGGTGAAGCCTAGTAATCCATCAGAGTTGGAATCCTTGATGGGTCCAAAGGAATATACGAAATTCTGTGAGGAAGAAGATGCTGCCCATTAG 498 0.4538 MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSSVLDGLKYATSHEWVKHEGSVATIGITDHAQDHLGEVVFVEIPEPGGSVSKGNGFGAVESVKATSDVNSPISGEVVEVNSKLSEAPGLINSSPYEDGWMIKVKPSNPSELESLMGPKEYTKFCEEEDAAH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0743 165 CDD GCS_H 43 137 IPR033753 -
Vvi2g0743 165 Pfam Glycine cleavage H-protein 41 160 IPR033753 -
Vvi2g0743 165 NCBIfam glycine cleavage system protein GcvH 39 162 IPR017453 GO:0005960|GO:0019464
Vvi2g0743 165 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 81 110 IPR003016 -
Vvi2g0743 165 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 3 162 IPR002930 GO:0005960|GO:0019464
Vvi2g0743 165 Hamap Glycine cleavage system H protein [gcvH]. 38 159 IPR002930 GO:0005960|GO:0019464
Vvi2g0743 165 ProSiteProfiles Biotinyl/lipoyl domain profile. 56 138 IPR000089 -
Vvi2g0743 165 Gene3D - 30 161 - -
Vvi2g0743 165 SUPERFAMILY Single hybrid motif 37 160 IPR011053 -
Vvi2g0743 165 FunFam Glycine cleavage system H protein 35 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0743 Vvi-Chr2 7118206 7119533 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0743 K02437 - vvi:100259229 334.339