Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0735 ATGTTCTCTGCATTTCTTGGGGGCTTAAATATTGCGATGGCCGGAGATGCGGTGTCTGGAATAAGTGGGGAAGATGGGAAGAAAAGTGTTGCAGTTTTTGCTGAGAAAATGAGGGTGTTGCCATGTCTGGTGTGGCAAAGGATTTCCAAGGTTGGACGAGACGATCCGAAAAGGGTGATTCACTCTCTGAAAGTCGGTGTGTCTTTGACACTGGTTTCCTTGTTGTACCTAATGGAGCCATTGTTTAAAGGCATTGGAGAAAATGCCATTTGGGCTGTCATGACTGTGGTGGTTGTGCTTGAGTTCACTGCAGGAGCAACTCTATGCAAAGGACTGAATAGAGGCCTCGGGACGGTGTTAGCGGGTTCATTGGCATTTTTGATGGAGTATATTGCAACTTCCTCTGGCCATGTATTTCGAGCTGTTTTCATTGGAACTGCAGTTTTTCTGACTGGAGCAGTAGCTACATATATAAGGTTCTTCCCCTTCATAAAGAAGAATTATGACTACGGTGTCGTGATATTTATCTTGACCTTTAATTTGATAACTGTGTCGAGCTACCGGGTAGACAATGTGTTGCAGTTAGCACACGAGCGCTTCTACACCATTGTCATTGGCTGTGCCATCTGCCTTTTTATGAGCCTTTTGATTTTCCCAAATTGGTCTGGGGAAGCCCTCCACAATTCCATGGTGTGCAAGCTTGAAGGGCTAGCAAAATCAGTCGAAGCTTGTGTGGATGAATACTTCAATAATGCTGAGGAACAAGAAAAGAAGGATGAACCATCAGAGGACCCCATTTACAAAGGTTACAAGGCAGTCTTGGACTCAAAATCCACAGAGGAGACCCTGGCATTACATGCGAGTTGGGAACCCAGGCACTCAATTCACTGCTACAGGTTTCCAGGGCAGCAGTATGTGAAATTGGGAGCTGCTCTTCGCCATTTTGGATACACTATCGTAGCTCTACACGGATGTTTGCAAACCGAAATTCAGACCCCGCATTCAGTCCGAGCCCTCTTCAAAGATCCATGCTTCCAAGTTGCTGCAGAAGTATCAAAAGTTCTCAAGGAGCTTGCCAATTGCATAAGGGCCCGACGCCACTGCGGTCAAGAGCTGCTCTCGGATCATCTCCATGAAGCCTTACAAGACCTCAACACGGCCGTAAAATCCCAGCCCAGGCTCTTCCTTGGCTCCAACAAGAATCAAGCCACTAACATGCTTGCAGTAGCTGCAGCAACAGCACGCCAGAAACGCGAAAAATACTCTGGGGTGTCCTTATCAAGCGTGAAAACAGACAGTTCAGCACTGATGGAATGGAAAAGCAAAAGGGCTTCTGAACAATCTTCAGAGGCAGATAGAAAGGTGTTGAGGCCCACACTAAGCAAGCTTGCCATCACTAGCCTGGAGTTCTCGGAAGCGCTTCCCTTTGCTGCCTTTGCGTCATTGCTAGTAGAGACAGTGGCAAGGCTTGAGCTTGTAATTGCGGAAGTTGAAGAACTGGCGAGGGTAGCGAGCTTCAAAGAGTATAAACCTGATGATGAGTTTGTTGTGATCTGCGAACCATCCCAAATGCGGAATGCTGACACTTTACATTGTAATTTGCCTTCCCATGGGGCAGAATGA 1623 0.4695 MFSAFLGGLNIAMAGDAVSGISGEDGKKSVAVFAEKMRVLPCLVWQRISKVGRDDPKRVIHSLKVGVSLTLVSLLYLMEPLFKGIGENAIWAVMTVVVVLEFTAGATLCKGLNRGLGTVLAGSLAFLMEYIATSSGHVFRAVFIGTAVFLTGAVATYIRFFPFIKKNYDYGVVIFILTFNLITVSSYRVDNVLQLAHERFYTIVIGCAICLFMSLLIFPNWSGEALHNSMVCKLEGLAKSVEACVDEYFNNAEEQEKKDEPSEDPIYKGYKAVLDSKSTEETLALHASWEPRHSIHCYRFPGQQYVKLGAALRHFGYTIVALHGCLQTEIQTPHSVRALFKDPCFQVAAEVSKVLKELANCIRARRHCGQELLSDHLHEALQDLNTAVKSQPRLFLGSNKNQATNMLAVAAATARQKREKYSGVSLSSVKTDSSALMEWKSKRASEQSSEADRKVLRPTLSKLAITSLEFSEALPFAAFASLLVETVARLELVIAEVEELARVASFKEYKPDDEFVVICEPSQMRNADTLHCNLPSHGAE* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0735 540 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 42 510 - -
Vvi2g0735 540 Pfam Aluminium activated malate transporter 50 501 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0735 Vvi-Chr2 7000696 7003620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0735 34 537 Miscellaneous Gene Families AT4G17970 61.029 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0735 - - vvi:100245421 1049.65