Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0728 ATGGATCTTCTACCACTCTGCAATTCCTGCACTTCAATCCACCGACAACCCACACTTTACCGGAAACTTTCTTCCCCATCAATCACCAATTTTCCATACAATTCCTTAAAATGCAGGCGTAAAACAACATCGGAGCTTCAAACCCCGGTCGGAGTCACCGGTCTCGCAGGTGGCTATTCTCCTTCAATACCCACCCACAAGGTTACTGTTCACGACAGACAACGAGGAGTGGTTCACGAATTCTTCGTTCCCGAGTACATATTGCACACTGCTGAATCTCAGAACATATCCCTTCCATTTGCTTGCAGGCACGGTTGTTGTACTAGCTGTGCTGTTCGTATAAAATCTGGACAAATTAGACAGCCAGAAGCGCTAGGGATATCTGCTGAACTGAAATCAAAGGGTTATGCACTTCTTTGTGTTGGCTTCCCGTCATCTGATATTGAAGTAGAAACTCAAGATGAGGATGAGGTATATTGGCTTCAATTTGGAAGATATTTTGCGCGTGGACCTATAGAAAGGGATGACTATGCATTGGAGTTAGCCATGGGTGATGAGTAA 561 0.4492 MDLLPLCNSCTSIHRQPTLYRKLSSPSITNFPYNSLKCRRKTTSELQTPVGVTGLAGGYSPSIPTHKVTVHDRQRGVVHEFFVPEYILHTAESQNISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKGYALLCVGFPSSDIEVETQDEDEVYWLQFGRYFARGPIERDDYALELAMGDE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0728 186 CDD fer2 68 151 IPR001041 GO:0051536
Vvi2g0728 186 Gene3D - 63 166 IPR012675 -
Vvi2g0728 186 PANTHER FERREDOXIN 31 159 - -
Vvi2g0728 186 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 66 156 IPR001041 GO:0051536
Vvi2g0728 186 Pfam 2Fe-2S iron-sulfur cluster binding domain 80 142 IPR001041 GO:0051536
Vvi2g0728 186 SUPERFAMILY 2Fe-2S ferredoxin-like 61 164 IPR036010 GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0728 K02639 - vvi:100242061 382.104