Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0716 ATGGCAGCGTCGACTTCCTTAAAAGAATATCTGAAACGATATGAAAGCAACAATGAAGAGGAAACAAAGAAAAAGAAGAAAAAGAAAAAGAAAACCAAACCAGATGTCTCAGGTGTCCTTGTTGTTGATGAAGATCCAACATGGCAAAAACCAGTTAAGCTTGAAGAAGAACATGATGATTCAGCAGATGAAGAGAAACCCCAAATTGATGAAGACATTGAAGTTAAGCGGATGAAGAGACTAGAGCAACTTAGGTCCAAACGTCCTTATCATGCCCTTTCTGAGGATGGGAGTGGTTGGGTTTCAATTTCTGCTGCTCCTACACATTCTGATTCTGGTGACCAAAATTCTGATGTGTCCCCGCCTCGTAGGCAGAGAGCTCGTTATGACACACCTTCACCAGAACCTGAACCCAGGCCTTCAGATTCGGGCAGAGAAGGTTCCGACTTGTCACCACCACGGCAGCGGCAAAGACGTTACCATACTCCGTCACCGGAACCGGGAAGTAAACCATCAGGTTCTGATTTCTCTCCTTCTCGTCGACCTCGTCGGCAGACCTCAGCAGATGTTGAAAGGAAGAACTCTGATTCACCCCATTTTCCTCACATTTCTTCCCCACGTCGTGTTGGCCGCAGTTCTGAACATCAAGATCTTTCACCCCCAAGGAAAAGGAGAAAGGGTCTTGGGTTGTCTGGATCACCTGATATTTCTCCTCCACGACGTTCTACTCAGACTGATACTCCAGATCTTTCCCCTCCAAGGAAAAGCCGTAAGGATGTTTCTTCCTCAAAAGAGCCGTCAAAAACTGGTTTGATTAGTGGTAAAGATATCGGGGAACTGAATGCTAAAACTAAGAAGAATGATTGGTTAAGGTTCAAAGAGATGGATCCTTTGATAAGTGGACGAGGTGCAGAACCTGTTTATCGTGACAAGAGAAAAGGAGATCGCATATCAAAGGAGGAATTCTTGAAGTCACAAAAGGGAGAAGAAAAGCCTAAGGAGAAAAAGTTGGAATGGGGCAAGGGCTTGGCTCAAAAGCGGGAAGCTGAAACTAAGCAGCAAGAATTAGAACTTGAGAAGGACAAACCATTTGCTCGGACCAGAGATGATCCAGAGCTCGATAAAATACTGAAGGATAGAGTAAGATGGGGTGATCCTATGGCACATTTAGTGAAGAGAAAGAATTCTGAGCTGATTCTGCCAGACCTGGGGGATGGTGAGAAGATGAAAGAATCAGGATTTATAATTCCTCAAGAAATTCCTAGTCACAGCTGGATAAAACGAGGATTAGATGCTGCACCGAATCGATATGGTATAAGACCAGGGAGGCACTGGGATGGCGTCGATCGGAGTACTGGTTTTGAGAAGCAGATGTTTAAAAGAACGAATGAGAAACAAGCTACAGAGAGAGAAGCTTATCTCTGGTCTGTGGCAGATATGTGA 1443 0.4463 MAASTSLKEYLKRYESNNEEETKKKKKKKKKTKPDVSGVLVVDEDPTWQKPVKLEEEHDDSADEEKPQIDEDIEVKRMKRLEQLRSKRPYHALSEDGSGWVSISAAPTHSDSGDQNSDVSPPRRQRARYDTPSPEPEPRPSDSGREGSDLSPPRQRQRRYHTPSPEPGSKPSGSDFSPSRRPRRQTSADVERKNSDSPHFPHISSPRRVGRSSEHQDLSPPRKRRKGLGLSGSPDISPPRRSTQTDTPDLSPPRKSRKDVSSSKEPSKTGLISGKDIGELNAKTKKNDWLRFKEMDPLISGRGAEPVYRDKRKGDRISKEEFLKSQKGEEKPKEKKLEWGKGLAQKREAETKQQELELEKDKPFARTRDDPELDKILKDRVRWGDPMAHLVKRKNSELILPDLGDGEKMKESGFIIPQEIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSTGFEKQMFKRTNEKQATEREAYLWSVADM* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0716 480 MobiDBLite consensus disorder prediction 305 367 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 1 367 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 182 198 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 101 120 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 69 92 - -
Vvi2g0716 480 PANTHER BUD13 HOMOLOG 1 480 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 208 224 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 236 250 - -
Vvi2g0716 480 Coils Coil 11 31 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 279 295 - -
Vvi2g0716 480 Pfam Pre-mRNA-splicing factor of RES complex 306 463 IPR018609 -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 167 181 - -
Vvi2g0716 480 MobiDBLite consensus disorder prediction 121 163 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0716 K13106 - vvi:100245538 928.317