Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0710 ATGTCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGCCCACTGGCAAGTCTCAATAGAAGAAGGAGAAGCCAAAGCTCGTGAACTTAACATCATGTTCATTGACACAAGTGCCAAAGCTGGCTTCAATATAAAGGCACTGTTTCAGAAAATTGCAGCTTTACCAGGAATGGAAACACTTTCTTCAGCCAAGCAAGAAGACATGGTTGATGTGAACCTAAAGTCTCCCAGCCTCAAGCAGGTGGATGCTCTTGTTGACACAATGGTGCCTCAAAGCCTTGCAATCTATAAGCCCAATCTCACCCCAGATCTGTAA 351 0.433 MSHVSDIKLIRTDTTLDLSQKAEKAHWQVSIEEGEAKARELNIMFIDTSAKAGFNIKALFQKIAALPGMETLSSAKQEDMVDVNLKSPSLKQVDALVDTMVPQSLAIYKPNLTPDL* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0710 116 Pfam Ras family 13 64 IPR001806 GO:0003924|GO:0005525
Vvi2g0710 116 PANTHER VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN 1 77 - -
Vvi2g0710 116 Gene3D - 2 70 IPR027417 -
Vvi2g0710 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 66 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0710 Vvi-Chr2 6680635 6681662 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0710 K07893 - vvi:100242004 111.694