Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0706 ATGACGACCATGGAGAGCTTGATCGGACTGGTGAATCGGATCCAAAGGGCTTGTACTGTTCTTGGCGACTATGGCGGCGACAGTGCTTTGCCTACTCTCTGGGAGGCTCTTCCCTCTGTTGCCGTCGTCGGTGGCCAGAGTTCGGGGAAATCGTCGGTATTGGAGAGCATCGTTGGACGTGATTTTCTTCCCAGGGGATCAGGGATTGTGACCAGGAGGCCTTTGGTACTGCAGCTACACAAAACTGAAGAGGGCCTACAGGAGTATGCTGAGTTTCTTCACTTGCCAAAGAGGAGATTCACTGACTTCTCCATTGTTCGGAAGGAAATTCAGGATGAAACTGATAGAATGACTGGGAGGACAAAACAGATTTCTCCAGTTCCTATCCATCTCAGCATCTACTCCGCAAATGTGGTTAATTTGACTTTGATAGATTTACCTGGTCTGACAAAGGTTGCAGTAGAGGGGCAGCCAGAAAGTATTGTTCAAGACATAGAGAACATGGTTCGTTCTTATATAGAGAAGCCAAACTGCATCATTCTGGCCATATCTCCAGCCAATCAAGATATTGCAACATCTGATGCTATGAAGCTCTCCAGAGAAGTTGATCCCACAGGTGAAAGGACATTTGGTGTGTTGACTAAGCTTGATTTGATGGACAAGGGAACCAATGCTTTAGATGTTCTTGAAGGAAGGTCGTATCGGCTGCTACATCCTTGGGTGGGAATTGTGAACCGCTCACAGGCTGATATCAATAAAAATGTAGATATGATTGCTGCACGGAGAAGGGAGCGTGAATTCTTTGCCACTAGTCCTGACTATGGGCATTTATCTAGCAAAATGGGCTCTGAATATCTTGCAAAACTTCTCTCTAAGCATTTAGAGGCTGTGATCAGGGCTCGCATACCAAGCATCACATCTTTGATTAATAAAAGCATTGATGAACTTGAAGGAGAGTTGGACCACCTTGGTAGACCCATTGCTATTGATGCTGGGGCTCAACTATATACCATTTTAGAGCTGTGTCGTGCATTTGATCGGATATTCAAAGAGCATTTGGAGGGAGGACGACCTGGTGGTGATCGGATTTATGGAGTTTTTGATAACCAGCTCCCTTCTGCTTTGAGGAAGCTTCCATTTGATCGTCATCTTTCACTGCAGAACGTAAGGAAAGTGATTTCAGAGGCAGATGGGTACCAACCTCATCTGATTGCGCCCGAGCAAGGTTACAGGCGCCTCATTGATAGTTCCCTTAATTATTTCAGAGGTCCAGCTGAAGCTTCAGTGGATGCTGTGCACTTTGTTCTGAAGGAGCTTGTGAGAAGGTCAATTGGAGAGACTAAGGAGTTGAGGCGCTTTCCCACTCTTCAGGCTGAACTTGCAGCAGCTTCCAATGAGGCATTGGAGAGGTTCCGTGAAGAAAGTAAGAAGACAACTCTGCGATTGGTGGAGATGGAATCCTCTTACCTGACTGTGGATTTCTTCCGAAAACTCCCTCAAGAAGTGGAGAAGGGCGGAAACCCATCTGCTTCTGCTGCAGATCGATATGGAGAGGGGCACTTCCGGAGGATAGGATCAAATGTCTCCCAATATGTGGCAATGGTATCTGAGACACTAAAGAACTCCATCCCAAAGGCTGTGGTCCATTGCCAAGTTAGGGAGGCCAAGCGGTCTTTACTTGATCACTTCTATACACAAGTGGGAAAAAAAGAGGGCAAGCAGCTTTCTCAGTTGCTGGATGAAGACCCTGCATTGATGGAAAGGAGGCAGCAATGTGCAAAGAGGCTTGAGTTGTACAAGTCTGCAAGGGATGAGATTGATTCGGTCTCGTGGAGCAGATGA 1842 0.4669 MTTMESLIGLVNRIQRACTVLGDYGGDSALPTLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTEEGLQEYAEFLHLPKRRFTDFSIVRKEIQDETDRMTGRTKQISPVPIHLSIYSANVVNLTLIDLPGLTKVAVEGQPESIVQDIENMVRSYIEKPNCIILAISPANQDIATSDAMKLSREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRLLHPWVGIVNRSQADINKNVDMIAARRREREFFATSPDYGHLSSKMGSEYLAKLLSKHLEAVIRARIPSITSLINKSIDELEGELDHLGRPIAIDAGAQLYTILELCRAFDRIFKEHLEGGRPGGDRIYGVFDNQLPSALRKLPFDRHLSLQNVRKVISEADGYQPHLIAPEQGYRRLIDSSLNYFRGPAEASVDAVHFVLKELVRRSIGETKELRRFPTLQAELAAASNEALERFREESKKTTLRLVEMESSYLTVDFFRKLPQEVEKGGNPSASAADRYGEGHFRRIGSNVSQYVAMVSETLKNSIPKAVVHCQVREAKRSLLDHFYTQVGKKEGKQLSQLLDEDPALMERRQQCAKRLELYKSARDEIDSVSWSR* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0706 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 311 IPR027417 -
Vvi2g0706 613 Gene3D - 4 312 IPR027417 -
Vvi2g0706 613 SMART dynamin_3 4 254 IPR001401 GO:0003924|GO:0005525
Vvi2g0706 613 FunFam dynamin-related protein 1E 4 312 - -
Vvi2g0706 613 CDD DLP_1 37 303 IPR001401 GO:0003924|GO:0005525
Vvi2g0706 613 Pfam Dynamin GTPase effector domain 518 609 IPR003130 GO:0003924|GO:0005525
Vvi2g0706 613 Gene3D Dynamin, middle domain 329 580 - -
Vvi2g0706 613 Pfam Dynamin central region 224 491 IPR000375 -
Vvi2g0706 613 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 63 72 IPR019762 -
Vvi2g0706 613 SMART GED_2 516 609 IPR003130 GO:0003924|GO:0005525
Vvi2g0706 613 ProSiteProfiles GED domain profile. 521 613 IPR020850 -
Vvi2g0706 613 PRINTS Dynamin signature 227 246 IPR022812 -
Vvi2g0706 613 PRINTS Dynamin signature 204 220 IPR022812 -
Vvi2g0706 613 PRINTS Dynamin signature 37 55 IPR022812 -
Vvi2g0706 613 PRINTS Dynamin signature 135 152 IPR022812 -
Vvi2g0706 613 PRINTS Dynamin signature 185 203 IPR022812 -
Vvi2g0706 613 PRINTS Dynamin signature 62 79 IPR022812 -
Vvi2g0706 613 FunFam Dynamin-related protein 1C 334 589 - -
Vvi2g0706 613 PANTHER DYNAMIN 5 609 IPR022812 -
Vvi2g0706 613 Pfam Dynamin family 40 215 IPR045063 -
Vvi2g0706 613 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 34 303 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0706 Vvi-Chr2 6647111 6657480 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0706 - - vvi:100247147 1181.39