Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0698 ATGGAGGTTGAGGGGGGAGTGCAGTTTGAGGACTACTTCCCTTCTATGATGGAGGGGTCGGGCGCTGAGGGCTTCATTATAGAGCTCTGCAATGGGTTTCACCTGCTCATGGACGTGGAGAAAGGGCTTATCACTTTTGAGAGCTTGAAGAGGAGTGCTTTGCTGTTGGGGTTGCAGGACATGGGAGATGATGAGATTGTGTCTATGTTGAGTGAGGGCGATTTGGATGGAGATGGGGCTCTCAACCAGATGGAGTTCTGCATTCTCATGATGAGACTGAGTCCGGGTTTACTGGATGAACCCAAGCAGTGGGTGGAGGAAATGTATATACATGAACCAGATGAAGAAGCTCTATGGTTTTAG 363 0.4931 MEVEGGVQFEDYFPSMMEGSGAEGFIIELCNGFHLLMDVEKGLITFESLKRSALLLGLQDMGDDEIVSMLSEGDLDGDGALNQMEFCILMMRLSPGLLDEPKQWVEEMYIHEPDEEALWF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0698 120 Pfam EF-hand domain pair 40 91 IPR002048 GO:0005509
Vvi2g0698 120 SUPERFAMILY EF-hand 23 102 IPR011992 -
Vvi2g0698 120 PANTHER CALCIUM-BINDING PROTEIN KIC 7 113 IPR044205 GO:0005509
Vvi2g0698 120 Gene3D - 7 117 - -
Vvi2g0698 120 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Vvi2g0698 120 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0698 Vvi-Chr2 6548464 6548826 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0698 8 111 EF-hand Containing Proteins AT5G54490 55.455 1.94e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0698 K24345 - vvi:100264287 247.669