Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0695 ATGGAAGTTGAAGGTGAAGTACTGCAATTTGAGGACTACTTCCCTTCCATGATGGAGGGTTTGGGGGCTGAGGGCTTCATGGAAGAGCTCTGCCAAGGGTTTCACTTGCTGATGGATGTGGAAAAAGGGCTCATCACTTTCGAGAGCTTGAGGAGGAGCACCTGGCAGTTAGGGTTGCAGGAGATGGGAGATGATGAGCTTGTGTGGATGCTGAGTGAGGGAGACTTGGATGGAGATGGGGCTCTCAATCAGACTGAGTTTTGCATTCTCATGTTGAGATTGAGTCCGGGTTTGATGGAGGGACCCAAGCAGTACTGGATGGAGGATATGTATACATGA 339 0.4985 MEVEGEVLQFEDYFPSMMEGLGAEGFMEELCQGFHLLMDVEKGLITFESLRRSTWQLGLQEMGDDELVWMLSEGDLDGDGALNQTEFCILMLRLSPGLMEGPKQYWMEDMYT* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0695 112 SUPERFAMILY EF-hand 27 95 IPR011992 -
Vvi2g0695 112 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Vvi2g0695 112 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Vvi2g0695 112 PANTHER CALCIUM-BINDING PROTEIN KIC 8 108 IPR044205 GO:0005509
Vvi2g0695 112 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Vvi2g0695 112 Gene3D - 8 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0695 Vvi-Chr2 6533662 6534000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0695 4 103 EF-hand Containing Proteins AT5G54490 57.426 1.77e-37 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0695 K24345 - vvi:100260800 235.343