Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0693 ATGAACGAAGAGCAGCGCTCACTCCTCCTCAAAACCTCTTCTCGTTTCCCGCCTCCACAAGGAGTGAAGCTCTCCTATGGCACTGCTGGGTTCAGAGCGGACGCGTCGATTTTGGAATCCACGGTGTACAGAGTTGGGATATTGGCGGCTCTGAGGTCGCTCAAGACCAAATCGGTGATTGGGTTGATGATCACTGCTTCCCACAACAAGGTCTCTGACAATGGAGTGAAAATCGCGGACCCCAGTGGTGGGATGCTGACCCAAAACTGGGAGCCTTTCGCCGATGCTCTCGCTAATGCCTCCGACCCTGAAGATCTTGTTCGGTTGATAATTGAATTTGTAAAGAAGGAAAACATCCATTTTGAAGGAGCATGTCCAGCTGAAGTTTTGTTGGGGAGGGACACAAGGCCCAGTGGCGGATCTCTCCTTGAAGCTGCAAAACAAGGAATCAGTTCAATTGTTGGAGCCATTGCCCTTGACATGGGGGTTTTAACAACTCCACAACTACATTGGATGGTTCGGGCTAGGAATAAGGGCATGAAAGCTTCTGAAGTTGACTACTTTGAACAGCTCTCAAGCTCCTTCAGGTGCTTGATGGATTTGATCCCTGAAGGAAGTAAGATCAATGAGATGGGTGACAAATTGATTGTGGATGGGGCTAATGGTGTGGGTGGAGAAAAACTAGCAGGGCTAAAGAATATGTTAAACAGTCCGGTTATTGATGTTCGTAATTCTGGAAAAGAGGGAGGTGTACTTAATGAAGGAGTTGGTGCTGATTATGTGCAGAAAGAGAAGGTTGTTCCTGTTGGTTTTGGACCCAGTGATGTTGGTTTAAGGTGTGCAAGTTTGGATGGAGATGCTGATCGTCTTGTATATTTCCTTGTGCTACCAAAAGACAACAAGATTGATCTTGTTGATGGGGACAAGATATTGTCTCTATTTGCCCTTTTTGTGAAGGAACAGCTAGCTATTCTCAACACCAATGGGAATGAAAAAATTAATAACTATTATCATGCATGTCTTGGTGTTGTGCAGACAGCTTATGCAAATGGGGCATCCACAGATTACCTCAAAAAGCAGGGCCTAGAAGTTTTGTTTACTCCAACAGGAGTGAAGTATTTGCATGAGAAAGCTGCTGAGTTTGACATTGGGATATATTTTGAGGCAAATGGACATGGAACCATCTTGTTCTCTGAAGAATTTTTGTGTTGGTTGGAGGCTAGAGATAATGAACTTTCTTCCATGTCTAAAGGTTCTGAACAGCAAAAGGCAGCTTCGAGACTATTGGCAGTCAGCAAGTTGATCAATCAAGCGGTGGGAGATGCTTTAAGTGGGTTGCTTTTGGTAGAGGCTATCTTGCAACATATGGGTTGGTCCATCCATATATGGAATGCACTTTACCAGGATCTACCCAGTAGGCAACTTAAGGTTAAAGTGGTAGATAGAACTGCTATTGTTACAGCAAATGCAGAAACTGTGGTTGTGAAGCCCCCTGGCCTTCAAGAAGCCATCAATGCTGAAATTGCAAAATACCCTCAAGGCCGATCTTTTGTACGACCATCAGGTACGGAGGATATAATACGTGTATATGCTGAGGCAACAACACAGGATGCTGCAGACAGCCTTGGAAATTCAGTGGCACGACTAGTGGATAAGTTCCTTGGATTCGGCAGCTCTTCATAA 1683 0.4492 MNEEQRSLLLKTSSRFPPPQGVKLSYGTAGFRADASILESTVYRVGILAALRSLKTKSVIGLMITASHNKVSDNGVKIADPSGGMLTQNWEPFADALANASDPEDLVRLIIEFVKKENIHFEGACPAEVLLGRDTRPSGGSLLEAAKQGISSIVGAIALDMGVLTTPQLHWMVRARNKGMKASEVDYFEQLSSSFRCLMDLIPEGSKINEMGDKLIVDGANGVGGEKLAGLKNMLNSPVIDVRNSGKEGGVLNEGVGADYVQKEKVVPVGFGPSDVGLRCASLDGDADRLVYFLVLPKDNKIDLVDGDKILSLFALFVKEQLAILNTNGNEKINNYYHACLGVVQTAYANGASTDYLKKQGLEVLFTPTGVKYLHEKAAEFDIGIYFEANGHGTILFSEEFLCWLEARDNELSSMSKGSEQQKAASRLLAVSKLINQAVGDALSGLLLVEAILQHMGWSIHIWNALYQDLPSRQLKVKVVDRTAIVTANAETVVVKPPGLQEAINAEIAKYPQGRSFVRPSGTEDIIRVYAEATTQDAADSLGNSVARLVDKFLGFGSSS* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0693 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 285 394 IPR016055 GO:0005975|GO:0016868
Vvi2g0693 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 53 101 IPR016055 GO:0005975|GO:0016868
Vvi2g0693 560 FunFam Phosphoacetylglucosamine mutase 306 400 - -
Vvi2g0693 560 Gene3D - 471 555 - -
Vvi2g0693 560 PANTHER PHOSPHOACETYLGLUCOSAMINE MUTASE 11 556 - -
Vvi2g0693 560 Gene3D - 2 181 - -
Vvi2g0693 560 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 476 549 IPR005843 GO:0016868|GO:0071704
Vvi2g0693 560 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 306 396 IPR005846 GO:0005975|GO:0016868
Vvi2g0693 560 PIRSF PAGM 1 556 IPR016657 GO:0004610
Vvi2g0693 560 FunFam Phosphoacetylglucosamine mutase 4 182 - -
Vvi2g0693 560 FunFam Phosphoacetylglucosamine mutase 471 556 - -
Vvi2g0693 560 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 56 89 IPR005844 GO:0005975|GO:0016868
Vvi2g0693 560 Gene3D - 303 399 - -
Vvi2g0693 560 FunFam Phosphoacetylglucosamine mutase 214 302 - -
Vvi2g0693 560 CDD PGM3 25 550 IPR016657 GO:0004610
Vvi2g0693 560 SUPERFAMILY Phosphoglucomutase, C-terminal domain 459 555 IPR036900 GO:0016868|GO:0071704
Vvi2g0693 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 187 293 IPR016055 GO:0005975|GO:0016868
Vvi2g0693 560 Gene3D - 207 302 - -
Vvi2g0693 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 110 177 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0693 Vvi-Chr2 6513192 6524424 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0693 K01836 - vvi:100259116 1096.65