Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0691 ATGGCAGACTTACCTGGACATGTGCTTGCCTGCTTGCATAGTGGGAAGCTTGCTTTCTTGGCAATTTTGGTTTCTGGAGGGATTGTATTGCAAATTTTGGCGTGTGCTCTGTTCAACAATTGGTGGCCTATGCTGACAGTAATAATGTATGTTCTTCTTCCCATGCCTTTGCTGTTCTTTGCTGGGTCTGACACTTCTTCTCTCTTTTCTGAATCTGGGAATAGCTGGGTGGACGCAACCAAATTCTTGACAGGAGCATCAGCTGTTGGGAGCATTGCTATACCGGCTATTCTAAAGCATGCTGGTGTAATTGGCTGGGGCGCCCTGGCATTGGAGCTCTCATCCTTCTTTGTAATTGTAGTAGCCATAATGTGTTACATCCAGATGAATTCCGACAATGAATACCGAATGCTCTGA 417 0.4556 MADLPGHVLACLHSGKLAFLAILVSGGIVLQILACALFNNWWPMLTVIMYVLLPMPLLFFAGSDTSSLFSESGNSWVDATKFLTGASAVGSIAIPAILKHAGVIGWGALALELSSFFVIVVAIMCYIQMNSDNEYRML* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0691 138 Pfam Vacuolar protein sorting 55 17 133 IPR007262 -
Vvi2g0691 138 PANTHER LEPTIN RECEPTOR-RELATED 14 133 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0691 Vvi-Chr2 6501539 6503700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0691 1 138 EF-hand Containing Proteins AT1G32410 73.571 2.99e-70 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0691 - - vvi:100248887 276.944